Gene : Glyma.04G122600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR30053:SF1 - ELONGATION FACTOR P (EF-P) FAMILY PROTEIN Genomic Order:  1226
Name:  ? Glyma.04G122600 Secondary Identifier:  ? PAC:30487253
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G122600 0.5kb upstream 0.5kb upstream 10470 true Chr04: 15763721-15774190 Glycine max
Glyma.04G122600 0.5kb upstream 0.5kb upstream 500 false Chr04: 15773691-15774190 Glycine max
Glyma.04G122600 0.5kb downstream 0.5kb downstream 10470 true Chr04: 15763221-15773690 Glycine max
Glyma.04G122600 0.5kb downstream 0.5kb downstream 500 false Chr04: 15763221-15763720 Glycine max
Glyma.04G122600 1.0kb upstream 1.0kb upstream 10970 true Chr04: 15763721-15774690 Glycine max
Glyma.04G122600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15773691-15774690 Glycine max
Glyma.04G122600 1.0kb downstream 1.0kb downstream 10970 true Chr04: 15762721-15773690 Glycine max
Glyma.04G122600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15762721-15763720 Glycine max
Glyma.04G122600 2.0kb upstream 2.0kb upstream 11970 true Chr04: 15763721-15775690 Glycine max
Glyma.04G122600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15773691-15775690 Glycine max
Glyma.04G122600 2.0kb downstream 2.0kb downstream 11970 true Chr04: 15761721-15773690 Glycine max
Glyma.04G122600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15761721-15763720 Glycine max
Glyma.04G122600 5.0kb upstream 5.0kb upstream 14970 true Chr04: 15763721-15778690 Glycine max
Glyma.04G122600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15773691-15778690 Glycine max
Glyma.04G122600 5.0kb downstream 5.0kb downstream 14970 true Chr04: 15758721-15773690 Glycine max
Glyma.04G122600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15758721-15763720 Glycine max
Glyma.04G122600 10.0kb upstream 10.0kb upstream 19970 true Chr04: 15763721-15783690 Glycine max
Glyma.04G122600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15773691-15783690 Glycine max
Glyma.04G122600 10.0kb downstream 10.0kb downstream 19970 true Chr04: 15753721-15773690 Glycine max
Glyma.04G122600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15753721-15763720 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306904 5265 Fabidae View MSA
124063397 5270 Rosid View MSA
123744181 5271 Pentapetalae View MSA
122791327 5272 Eudicot View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.22371 0.0 24.1258   Low
cufflinks 6.63713 0.0 31.5302    
cufflinks 4.67835 0.0 24.9883   Low
cufflinks 6.63498 0.0 31.2319    
cufflinks 8.51082 0.0 38.2827   High
cufflinks 5.35839 0.0 27.6344    
cufflinks 6.31317 0.0 30.6255    
cufflinks 6.14793 0.0 26.3438    
cufflinks 8.11086 0.0 36.2951   High
cufflinks 0.184        
cufflinks 0.082       Low
cufflinks 0.203        
cufflinks 0.289       High
cufflinks 0.311       High
cufflinks 0.129        
cufflinks 0.134        
cufflinks 0.125        
cufflinks 0.262       High
cufflinks 0.184        
cufflinks 0.12        
cufflinks 0.091       Low
cufflinks 0.113        
cufflinks 0.168        
cufflinks 0.099        
cufflinks 0.117        
cufflinks 0.096       Low

0 Strain