Gene : Glyma.19G134900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22942:SF41 - DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL Genomic Order:  1349
Name:  ? Glyma.19G134900 Secondary Identifier:  ? PAC:30512802
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G134900 0.5kb upstream 0.5kb upstream 6707 true Chr19: 39588459-39595165 Glycine max
Glyma.19G134900 0.5kb upstream 0.5kb upstream 500 false Chr19: 39594666-39595165 Glycine max
Glyma.19G134900 0.5kb downstream 0.5kb downstream 6707 true Chr19: 39587959-39594665 Glycine max
Glyma.19G134900 0.5kb downstream 0.5kb downstream 500 false Chr19: 39587959-39588458 Glycine max
Glyma.19G134900 1.0kb upstream 1.0kb upstream 7207 true Chr19: 39588459-39595665 Glycine max
Glyma.19G134900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 39594666-39595665 Glycine max
Glyma.19G134900 1.0kb downstream 1.0kb downstream 7207 true Chr19: 39587459-39594665 Glycine max
Glyma.19G134900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 39587459-39588458 Glycine max
Glyma.19G134900 2.0kb upstream 2.0kb upstream 8207 true Chr19: 39588459-39596665 Glycine max
Glyma.19G134900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 39594666-39596665 Glycine max
Glyma.19G134900 2.0kb downstream 2.0kb downstream 8207 true Chr19: 39586459-39594665 Glycine max
Glyma.19G134900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 39586459-39588458 Glycine max
Glyma.19G134900 5.0kb upstream 5.0kb upstream 11207 true Chr19: 39588459-39599665 Glycine max
Glyma.19G134900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 39594666-39599665 Glycine max
Glyma.19G134900 5.0kb downstream 5.0kb downstream 11207 true Chr19: 39583459-39594665 Glycine max
Glyma.19G134900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 39583459-39588458 Glycine max
Glyma.19G134900 10.0kb upstream 10.0kb upstream 16207 true Chr19: 39588459-39604665 Glycine max
Glyma.19G134900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 39594666-39604665 Glycine max
Glyma.19G134900 10.0kb downstream 10.0kb downstream 16207 true Chr19: 39578459-39594665 Glycine max
Glyma.19G134900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 39578459-39588458 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026428 5273 Angiosperm View MSA
122305206 5265 Fabidae View MSA
124066586 5270 Rosid View MSA
123739358 5271 Pentapetalae View MSA
122787023 5272 Eudicot View MSA
121296323 5274 Embryophyte View MSA
123334505 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57379 0.0 16.7377    
cufflinks 3.16239 0.0 17.5136    
cufflinks 1.47899 0.0 9.35311   Low
cufflinks 2.11473 0.0 13.251    
cufflinks 5.38315 0.0 25.1339   High
cufflinks 3.10564 0.0 19.724    
cufflinks 2.17991 0.0 15.0266    
cufflinks 2.66835 0.0 15.6844    
cufflinks 3.38707 0.0 18.1279    
cufflinks 0.1        
cufflinks 0.036     Low Low
cufflinks 0.118     Low  
cufflinks 0.423       High
cufflinks 0.53       High
cufflinks 0.082        
cufflinks 0.081     Low  
cufflinks 0.125        
cufflinks 0.12        
cufflinks 0.217        
cufflinks 0.057     Low  
cufflinks 0.056     Low  
cufflinks 0.081     Low  
cufflinks 0.204        
cufflinks 0.055     Low  
cufflinks 0.076     Low  
cufflinks 0.114        

0 Strain