Gene : Glyma.04G121300 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  1213
Name:  ? Glyma.04G121300 Secondary Identifier:  ? PAC:30487338
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5129 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G121300 0.5kb upstream 0.5kb upstream 19636 true Chr04: 15188268-15207903 Glycine max
Glyma.04G121300 0.5kb upstream 0.5kb upstream 500 false Chr04: 15207404-15207903 Glycine max
Glyma.04G121300 0.5kb downstream 0.5kb downstream 19636 true Chr04: 15187768-15207403 Glycine max
Glyma.04G121300 0.5kb downstream 0.5kb downstream 500 false Chr04: 15187768-15188267 Glycine max
Glyma.04G121300 1.0kb upstream 1.0kb upstream 20136 true Chr04: 15188268-15208403 Glycine max
Glyma.04G121300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 15207404-15208403 Glycine max
Glyma.04G121300 1.0kb downstream 1.0kb downstream 20136 true Chr04: 15187268-15207403 Glycine max
Glyma.04G121300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 15187268-15188267 Glycine max
Glyma.04G121300 2.0kb upstream 2.0kb upstream 21136 true Chr04: 15188268-15209403 Glycine max
Glyma.04G121300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 15207404-15209403 Glycine max
Glyma.04G121300 2.0kb downstream 2.0kb downstream 21136 true Chr04: 15186268-15207403 Glycine max
Glyma.04G121300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 15186268-15188267 Glycine max
Glyma.04G121300 5.0kb upstream 5.0kb upstream 24136 true Chr04: 15188268-15212403 Glycine max
Glyma.04G121300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 15207404-15212403 Glycine max
Glyma.04G121300 5.0kb downstream 5.0kb downstream 24136 true Chr04: 15183268-15207403 Glycine max
Glyma.04G121300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 15183268-15188267 Glycine max
Glyma.04G121300 10.0kb upstream 10.0kb upstream 29136 true Chr04: 15188268-15217403 Glycine max
Glyma.04G121300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 15207404-15217403 Glycine max
Glyma.04G121300 10.0kb downstream 10.0kb downstream 29136 true Chr04: 15178268-15207403 Glycine max
Glyma.04G121300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 15178268-15188267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308468 5265 Fabidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.11631 0.0 17.1136    
cufflinks 2.16211 0.0 11.1324    
cufflinks 6.34591 0.0 23.3157   High
cufflinks 2.92972 0.0 11.3821    
cufflinks 2.44355 0.0 10.0696    
cufflinks 10.4434 0.0 40.5698   High
cufflinks 2.29047 0.0 13.5605    
cufflinks 2.41611 0.0 16.1664    
cufflinks 3.4917 0.0 21.041    
cufflinks 0.062     Low Low
cufflinks 0.139        
cufflinks 0.151        
cufflinks 0.125        
cufflinks 0.106        
cufflinks 0.145        
cufflinks 0.106        
cufflinks 0.078       Low
cufflinks 0.203       High
cufflinks 0.115        
cufflinks 0.092     Low  
cufflinks 0.101        
cufflinks 0.113        
cufflinks 0.117        
cufflinks 0.179       High
cufflinks 0.101        
cufflinks 0.101        

0 Strain