Gene : Glyma.04G118900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31080:SF8 - F23N19.12 Genomic Order:  1189
Name:  ? Glyma.04G118900 Secondary Identifier:  ? PAC:30491096
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G118900 0.5kb upstream 0.5kb upstream 1499 true Chr04: 14200503-14202001 Glycine max
Glyma.04G118900 0.5kb upstream 0.5kb upstream 500 false Chr04: 14201502-14202001 Glycine max
Glyma.04G118900 0.5kb downstream 0.5kb downstream 1499 true Chr04: 14200003-14201501 Glycine max
Glyma.04G118900 0.5kb downstream 0.5kb downstream 500 false Chr04: 14200003-14200502 Glycine max
Glyma.04G118900 1.0kb upstream 1.0kb upstream 1999 true Chr04: 14200503-14202501 Glycine max
Glyma.04G118900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 14201502-14202501 Glycine max
Glyma.04G118900 1.0kb downstream 1.0kb downstream 1999 true Chr04: 14199503-14201501 Glycine max
Glyma.04G118900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 14199503-14200502 Glycine max
Glyma.04G118900 2.0kb upstream 2.0kb upstream 2999 true Chr04: 14200503-14203501 Glycine max
Glyma.04G118900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 14201502-14203501 Glycine max
Glyma.04G118900 2.0kb downstream 2.0kb downstream 2999 true Chr04: 14198503-14201501 Glycine max
Glyma.04G118900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 14198503-14200502 Glycine max
Glyma.04G118900 5.0kb upstream 5.0kb upstream 5999 true Chr04: 14200503-14206501 Glycine max
Glyma.04G118900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 14201502-14206501 Glycine max
Glyma.04G118900 5.0kb downstream 5.0kb downstream 5999 true Chr04: 14195503-14201501 Glycine max
Glyma.04G118900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 14195503-14200502 Glycine max
Glyma.04G118900 10.0kb upstream 10.0kb upstream 10999 true Chr04: 14200503-14211501 Glycine max
Glyma.04G118900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 14201502-14211501 Glycine max
Glyma.04G118900 10.0kb downstream 10.0kb downstream 10999 true Chr04: 14190503-14201501 Glycine max
Glyma.04G118900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 14190503-14200502 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304069 5265 Fabidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.122255 0.0 0.492737 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.0648 0.0 39.3483    
cufflinks 292.692 0.0 984.159 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0713083 0.0 0.295305 Low Low
cufflinks 5.79684 0.0 18.0864    
cufflinks 0.014     Low Low
cufflinks 0.194        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 34.739     High High
cufflinks 32.347     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.175        
cufflinks 0.053     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.771        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.296        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.706        

0 Strain