Gene : Glyma.04G139400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33923:SF2 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  1394
Name:  ? Glyma.04G139400 Secondary Identifier:  ? PAC:30490416
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G139400 0.5kb upstream 0.5kb upstream 4517 true Chr04: 22478685-22483201 Glycine max
Glyma.04G139400 0.5kb upstream 0.5kb upstream 500 false Chr04: 22478685-22479184 Glycine max
Glyma.04G139400 0.5kb downstream 0.5kb downstream 4517 true Chr04: 22479185-22483701 Glycine max
Glyma.04G139400 0.5kb downstream 0.5kb downstream 500 false Chr04: 22483202-22483701 Glycine max
Glyma.04G139400 1.0kb upstream 1.0kb upstream 5017 true Chr04: 22478185-22483201 Glycine max
Glyma.04G139400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22478185-22479184 Glycine max
Glyma.04G139400 1.0kb downstream 1.0kb downstream 5017 true Chr04: 22479185-22484201 Glycine max
Glyma.04G139400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22483202-22484201 Glycine max
Glyma.04G139400 2.0kb upstream 2.0kb upstream 6017 true Chr04: 22477185-22483201 Glycine max
Glyma.04G139400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22477185-22479184 Glycine max
Glyma.04G139400 2.0kb downstream 2.0kb downstream 6017 true Chr04: 22479185-22485201 Glycine max
Glyma.04G139400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22483202-22485201 Glycine max
Glyma.04G139400 5.0kb upstream 5.0kb upstream 9017 true Chr04: 22474185-22483201 Glycine max
Glyma.04G139400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22474185-22479184 Glycine max
Glyma.04G139400 5.0kb downstream 5.0kb downstream 9017 true Chr04: 22479185-22488201 Glycine max
Glyma.04G139400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22483202-22488201 Glycine max
Glyma.04G139400 10.0kb upstream 10.0kb upstream 14017 true Chr04: 22469185-22483201 Glycine max
Glyma.04G139400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22469185-22479184 Glycine max
Glyma.04G139400 10.0kb downstream 10.0kb downstream 14017 true Chr04: 22479185-22493201 Glycine max
Glyma.04G139400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22483202-22493201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310915 5265 Fabidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.79357 0.0 20.7945    
cufflinks 3.85134 0.0 10.5647   Low
cufflinks 12.8679 0.0 34.7636    
cufflinks 6.86016 0.0 18.3223    
cufflinks 9.18593 0.0 24.5207    
cufflinks 53.4914 0.0 172.282 High High
cufflinks 17.3447 0.0 47.6888    
cufflinks 10.01 0.0 26.7866    
cufflinks 11.7246 0.0 31.4934    
cufflinks 10.933     High  
cufflinks 32.638     High High
cufflinks 12.595     High  
cufflinks 15.279     High  
cufflinks 7.933     High  
cufflinks 1.86       Low
cufflinks 12.396     High  
cufflinks 16.774     High  
cufflinks 6.371        
cufflinks 5.72       Low
cufflinks 12.025     High  
cufflinks 24.97     High  
cufflinks 14.37     High  
cufflinks 7.164        
cufflinks 41.435     High High
cufflinks 13.319     High  
cufflinks 22.338     High  

0 Strain