Gene : Glyma.04G133400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  1334
Name:  ? Glyma.04G133400 Secondary Identifier:  ? PAC:30490192
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G133400 0.5kb upstream 0.5kb upstream 3590 true Chr04: 18992743-18996332 Glycine max
Glyma.04G133400 0.5kb upstream 0.5kb upstream 500 false Chr04: 18995833-18996332 Glycine max
Glyma.04G133400 0.5kb downstream 0.5kb downstream 3590 true Chr04: 18992243-18995832 Glycine max
Glyma.04G133400 0.5kb downstream 0.5kb downstream 500 false Chr04: 18992243-18992742 Glycine max
Glyma.04G133400 1.0kb upstream 1.0kb upstream 4090 true Chr04: 18992743-18996832 Glycine max
Glyma.04G133400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18995833-18996832 Glycine max
Glyma.04G133400 1.0kb downstream 1.0kb downstream 4090 true Chr04: 18991743-18995832 Glycine max
Glyma.04G133400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18991743-18992742 Glycine max
Glyma.04G133400 2.0kb upstream 2.0kb upstream 5090 true Chr04: 18992743-18997832 Glycine max
Glyma.04G133400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18995833-18997832 Glycine max
Glyma.04G133400 2.0kb downstream 2.0kb downstream 5090 true Chr04: 18990743-18995832 Glycine max
Glyma.04G133400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18990743-18992742 Glycine max
Glyma.04G133400 5.0kb upstream 5.0kb upstream 8090 true Chr04: 18992743-19000832 Glycine max
Glyma.04G133400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18995833-19000832 Glycine max
Glyma.04G133400 5.0kb downstream 5.0kb downstream 8090 true Chr04: 18987743-18995832 Glycine max
Glyma.04G133400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18987743-18992742 Glycine max
Glyma.04G133400 10.0kb upstream 10.0kb upstream 13090 true Chr04: 18992743-19005832 Glycine max
Glyma.04G133400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18995833-19005832 Glycine max
Glyma.04G133400 10.0kb downstream 10.0kb downstream 13090 true Chr04: 18982743-18995832 Glycine max
Glyma.04G133400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18982743-18992742 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312732 5265 Fabidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2243 0.0 58.2502   High
cufflinks 0.139721 0.0 0.555458 Low  
cufflinks 3.13845 0.0 10.8304    
cufflinks 1.51997 0.0 12.361    
cufflinks 0.322002 0.0 2.24874    
cufflinks 0.357645 0.0 1.72572    
cufflinks 0.564154 0.0 2.76408    
cufflinks 0.383669 0.0 2.61984    
cufflinks 0.0718596 0.0 0.295268 Low Low
cufflinks 0.444        
cufflinks 0.073        
cufflinks 0.363        
cufflinks 0.243        
cufflinks 0.116        
cufflinks 0.038     Low Low
cufflinks 0.697       High
cufflinks 0.023     Low Low
cufflinks 0.487        
cufflinks 0.103        
cufflinks 0.124        
cufflinks 0.043     Low Low
cufflinks 0.558       High
cufflinks 0.246        
cufflinks 0.065        
cufflinks 0.961       High
cufflinks 0.124        

0 Strain