Gene : Glyma.04G134900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13586:SF0 - TRAILER HITCH, ISOFORM H Genomic Order:  1349
Name:  ? Glyma.04G134900 Secondary Identifier:  ? PAC:30489340
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G134900 0.5kb upstream 0.5kb upstream 6588 true Chr04: 19574635-19581222 Glycine max
Glyma.04G134900 0.5kb upstream 0.5kb upstream 500 false Chr04: 19574635-19575134 Glycine max
Glyma.04G134900 0.5kb downstream 0.5kb downstream 6588 true Chr04: 19575135-19581722 Glycine max
Glyma.04G134900 0.5kb downstream 0.5kb downstream 500 false Chr04: 19581223-19581722 Glycine max
Glyma.04G134900 1.0kb upstream 1.0kb upstream 7088 true Chr04: 19574135-19581222 Glycine max
Glyma.04G134900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19574135-19575134 Glycine max
Glyma.04G134900 1.0kb downstream 1.0kb downstream 7088 true Chr04: 19575135-19582222 Glycine max
Glyma.04G134900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19581223-19582222 Glycine max
Glyma.04G134900 2.0kb upstream 2.0kb upstream 8088 true Chr04: 19573135-19581222 Glycine max
Glyma.04G134900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19573135-19575134 Glycine max
Glyma.04G134900 2.0kb downstream 2.0kb downstream 8088 true Chr04: 19575135-19583222 Glycine max
Glyma.04G134900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19581223-19583222 Glycine max
Glyma.04G134900 5.0kb upstream 5.0kb upstream 11088 true Chr04: 19570135-19581222 Glycine max
Glyma.04G134900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19570135-19575134 Glycine max
Glyma.04G134900 5.0kb downstream 5.0kb downstream 11088 true Chr04: 19575135-19586222 Glycine max
Glyma.04G134900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19581223-19586222 Glycine max
Glyma.04G134900 10.0kb upstream 10.0kb upstream 16088 true Chr04: 19565135-19581222 Glycine max
Glyma.04G134900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19565135-19575134 Glycine max
Glyma.04G134900 10.0kb downstream 10.0kb downstream 16088 true Chr04: 19575135-19591222 Glycine max
Glyma.04G134900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19581223-19591222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309189 5265 Fabidae View MSA
124065537 5270 Rosid View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6312 0.0 47.1093    
cufflinks 15.5193 0.0 41.4065    
cufflinks 13.4416 0.0 35.8742    
cufflinks 17.2291 0.0 46.0158    
cufflinks 15.5261 0.0 41.4256    
cufflinks 10.5192 0.0 28.2299   Low
cufflinks 22.2324 0.0 59.8138 High High
cufflinks 16.3819 0.0 43.7312    
cufflinks 12.9318 0.0 34.5312    
cufflinks 4.48        
cufflinks 3.574       Low
cufflinks 5.134        
cufflinks 4.634        
cufflinks 4.896        
cufflinks 4.994        
cufflinks 5.218        
cufflinks 2.703       Low
cufflinks 5.032        
cufflinks 6.773       High
cufflinks 4.99        
cufflinks 4.18        
cufflinks 5.063        
cufflinks 5.276        
cufflinks 4.17        
cufflinks 4.713        
cufflinks 3.599       Low

0 Strain