Gene : Glyma.04G129000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF14966 - DNA repair REX1-B (DNA_repr_REX1B) Genomic Order:  1290
Name:  ? Glyma.04G129000 Secondary Identifier:  ? PAC:30490583
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G129000 0.5kb upstream 0.5kb upstream 5173 true Chr04: 17964578-17969750 Glycine max
Glyma.04G129000 0.5kb upstream 0.5kb upstream 500 false Chr04: 17969251-17969750 Glycine max
Glyma.04G129000 0.5kb downstream 0.5kb downstream 5173 true Chr04: 17964078-17969250 Glycine max
Glyma.04G129000 0.5kb downstream 0.5kb downstream 500 false Chr04: 17964078-17964577 Glycine max
Glyma.04G129000 1.0kb upstream 1.0kb upstream 5673 true Chr04: 17964578-17970250 Glycine max
Glyma.04G129000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17969251-17970250 Glycine max
Glyma.04G129000 1.0kb downstream 1.0kb downstream 5673 true Chr04: 17963578-17969250 Glycine max
Glyma.04G129000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17963578-17964577 Glycine max
Glyma.04G129000 2.0kb upstream 2.0kb upstream 6673 true Chr04: 17964578-17971250 Glycine max
Glyma.04G129000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17969251-17971250 Glycine max
Glyma.04G129000 2.0kb downstream 2.0kb downstream 6673 true Chr04: 17962578-17969250 Glycine max
Glyma.04G129000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17962578-17964577 Glycine max
Glyma.04G129000 5.0kb upstream 5.0kb upstream 9673 true Chr04: 17964578-17974250 Glycine max
Glyma.04G129000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17969251-17974250 Glycine max
Glyma.04G129000 5.0kb downstream 5.0kb downstream 9673 true Chr04: 17959578-17969250 Glycine max
Glyma.04G129000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17959578-17964577 Glycine max
Glyma.04G129000 10.0kb upstream 10.0kb upstream 14673 true Chr04: 17964578-17979250 Glycine max
Glyma.04G129000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17969251-17979250 Glycine max
Glyma.04G129000 10.0kb downstream 10.0kb downstream 14673 true Chr04: 17954578-17969250 Glycine max
Glyma.04G129000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17954578-17964577 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306560 5265 Fabidae View MSA
124062488 5270 Rosid View MSA
123750657 5271 Pentapetalae View MSA
122790384 5272 Eudicot View MSA
122048656 5273 Angiosperm View MSA
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.33288 0.0 9.71032    
cufflinks 2.12496 0.0 6.60239   Low
cufflinks 3.31852 0.0 9.65085    
cufflinks 2.52129 0.0 7.6219    
cufflinks 2.89689 0.0 8.60143    
cufflinks 3.71312 0.0 10.6619   High
cufflinks 1.99336 0.0 6.23987   Low
cufflinks 2.93638 0.0 8.72084    
cufflinks 2.57489 0.0 7.77685    
cufflinks 1.52       Low
cufflinks 2.177        
cufflinks 2.751        
cufflinks 2.642        
cufflinks 3.342       High
cufflinks 1.343       Low
cufflinks 2.353        
cufflinks 1.558       Low
cufflinks 2.929       High
cufflinks 2.269        
cufflinks 2.828        
cufflinks 2.024        
cufflinks 2.682        
cufflinks 1.902        
cufflinks 2.389        
cufflinks 2.827        
cufflinks 1.744        

0 Strain