Gene : Glyma.04G136700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Genomic Order:  1367
Name:  ? Glyma.04G136700 Secondary Identifier:  ? PAC:30489130
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G136700 0.5kb upstream 0.5kb upstream 5750 true Chr04: 20424174-20429923 Glycine max
Glyma.04G136700 0.5kb upstream 0.5kb upstream 500 false Chr04: 20429424-20429923 Glycine max
Glyma.04G136700 0.5kb downstream 0.5kb downstream 5750 true Chr04: 20423674-20429423 Glycine max
Glyma.04G136700 0.5kb downstream 0.5kb downstream 500 false Chr04: 20423674-20424173 Glycine max
Glyma.04G136700 1.0kb upstream 1.0kb upstream 6250 true Chr04: 20424174-20430423 Glycine max
Glyma.04G136700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20429424-20430423 Glycine max
Glyma.04G136700 1.0kb downstream 1.0kb downstream 6250 true Chr04: 20423174-20429423 Glycine max
Glyma.04G136700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20423174-20424173 Glycine max
Glyma.04G136700 2.0kb upstream 2.0kb upstream 7250 true Chr04: 20424174-20431423 Glycine max
Glyma.04G136700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20429424-20431423 Glycine max
Glyma.04G136700 2.0kb downstream 2.0kb downstream 7250 true Chr04: 20422174-20429423 Glycine max
Glyma.04G136700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20422174-20424173 Glycine max
Glyma.04G136700 5.0kb upstream 5.0kb upstream 10250 true Chr04: 20424174-20434423 Glycine max
Glyma.04G136700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20429424-20434423 Glycine max
Glyma.04G136700 5.0kb downstream 5.0kb downstream 10250 true Chr04: 20419174-20429423 Glycine max
Glyma.04G136700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20419174-20424173 Glycine max
Glyma.04G136700 10.0kb upstream 10.0kb upstream 15250 true Chr04: 20424174-20439423 Glycine max
Glyma.04G136700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20429424-20439423 Glycine max
Glyma.04G136700 10.0kb downstream 10.0kb downstream 15250 true Chr04: 20414174-20429423 Glycine max
Glyma.04G136700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20414174-20424173 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302591 5265 Fabidae View MSA
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257916 0.0 1.25002   Low
cufflinks 2.63855 0.0 13.4031    
cufflinks 2.59476 0.0 13.1455    
cufflinks 11.395 0.0 43.1384   High
cufflinks 3.2034 0.0 15.2086    
cufflinks 0.444881 0.0 2.9479   Low
cufflinks 1.28011 0.0 8.12953    
cufflinks 8.47525 0.0 30.0084   High
cufflinks 5.144 0.0 20.8359    
cufflinks 0.611       High
cufflinks 0.028     Low Low
cufflinks 0.948       High
cufflinks 0.299        
cufflinks 0.121        
cufflinks 0.029     Low Low
cufflinks 0.098     Low  
cufflinks 0.152        
cufflinks 1.418       High
cufflinks 0.311        
cufflinks 0.079     Low  
cufflinks 0.02     Low Low
cufflinks 0.115        
cufflinks 0.11        
cufflinks 0.039     Low  
cufflinks 0.085     Low  
cufflinks 0.03     Low Low

0 Strain