Gene : Glyma.04G152200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13677:SF0 - PROTEIN F53H1.3, ISOFORM A Genomic Order:  1522
Name:  ? Glyma.04G152200 Secondary Identifier:  ? PAC:30490916
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G152200 0.5kb upstream 0.5kb upstream 8499 true Chr04: 33994673-34003171 Glycine max
Glyma.04G152200 0.5kb upstream 0.5kb upstream 500 false Chr04: 34002672-34003171 Glycine max
Glyma.04G152200 0.5kb downstream 0.5kb downstream 8499 true Chr04: 33994173-34002671 Glycine max
Glyma.04G152200 0.5kb downstream 0.5kb downstream 500 false Chr04: 33994173-33994672 Glycine max
Glyma.04G152200 1.0kb upstream 1.0kb upstream 8999 true Chr04: 33994673-34003671 Glycine max
Glyma.04G152200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 34002672-34003671 Glycine max
Glyma.04G152200 1.0kb downstream 1.0kb downstream 8999 true Chr04: 33993673-34002671 Glycine max
Glyma.04G152200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 33993673-33994672 Glycine max
Glyma.04G152200 2.0kb upstream 2.0kb upstream 9999 true Chr04: 33994673-34004671 Glycine max
Glyma.04G152200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 34002672-34004671 Glycine max
Glyma.04G152200 2.0kb downstream 2.0kb downstream 9999 true Chr04: 33992673-34002671 Glycine max
Glyma.04G152200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 33992673-33994672 Glycine max
Glyma.04G152200 5.0kb upstream 5.0kb upstream 12999 true Chr04: 33994673-34007671 Glycine max
Glyma.04G152200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 34002672-34007671 Glycine max
Glyma.04G152200 5.0kb downstream 5.0kb downstream 12999 true Chr04: 33989673-34002671 Glycine max
Glyma.04G152200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 33989673-33994672 Glycine max
Glyma.04G152200 10.0kb upstream 10.0kb upstream 17999 true Chr04: 33994673-34012671 Glycine max
Glyma.04G152200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 34002672-34012671 Glycine max
Glyma.04G152200 10.0kb downstream 10.0kb downstream 17999 true Chr04: 33984673-34002671 Glycine max
Glyma.04G152200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 33984673-33994672 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310377 5265 Fabidae View MSA
124067041 5270 Rosid View MSA
123739049 5271 Pentapetalae View MSA
122789935 5272 Eudicot View MSA
122046522 5273 Angiosperm View MSA
121346566 5274 Embryophyte View MSA
123427841 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56908 0.0 12.8833    
cufflinks 3.10566 0.0 16.8839   High
cufflinks 2.01563 0.0 11.8763   Low
cufflinks 2.93886 0.0 14.1645    
cufflinks 3.03651 0.0 14.444    
cufflinks 2.66461 0.0 11.5536    
cufflinks 2.1272 0.0 10.1759   Low
cufflinks 2.84218 0.0 15.0938    
cufflinks 2.45983 0.0 12.2959    
cufflinks 0.2        
cufflinks 0.071       Low
cufflinks 0.142        
cufflinks 0.211        
cufflinks 0.2        
cufflinks 0.041     Low Low
cufflinks 0.185        
cufflinks 0.087        
cufflinks 0.215        
cufflinks 0.154        
cufflinks 0.173        
cufflinks 0.061     Low Low
cufflinks 0.18        
cufflinks 0.191        
cufflinks 0.108        
cufflinks 0.153        
cufflinks 0.069       Low

0 Strain