Gene : Glyma.04G171700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21183 - RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED Genomic Order:  1717
Name:  ? Glyma.04G171700 Secondary Identifier:  ? PAC:30489129
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G171700 0.5kb upstream 0.5kb upstream 3231 true Chr04: 42862750-42865980 Glycine max
Glyma.04G171700 0.5kb upstream 0.5kb upstream 500 false Chr04: 42865481-42865980 Glycine max
Glyma.04G171700 0.5kb downstream 0.5kb downstream 3231 true Chr04: 42862250-42865480 Glycine max
Glyma.04G171700 0.5kb downstream 0.5kb downstream 500 false Chr04: 42862250-42862749 Glycine max
Glyma.04G171700 1.0kb upstream 1.0kb upstream 3731 true Chr04: 42862750-42866480 Glycine max
Glyma.04G171700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42865481-42866480 Glycine max
Glyma.04G171700 1.0kb downstream 1.0kb downstream 3731 true Chr04: 42861750-42865480 Glycine max
Glyma.04G171700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42861750-42862749 Glycine max
Glyma.04G171700 2.0kb upstream 2.0kb upstream 4731 true Chr04: 42862750-42867480 Glycine max
Glyma.04G171700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42865481-42867480 Glycine max
Glyma.04G171700 2.0kb downstream 2.0kb downstream 4731 true Chr04: 42860750-42865480 Glycine max
Glyma.04G171700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42860750-42862749 Glycine max
Glyma.04G171700 5.0kb upstream 5.0kb upstream 7731 true Chr04: 42862750-42870480 Glycine max
Glyma.04G171700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42865481-42870480 Glycine max
Glyma.04G171700 5.0kb downstream 5.0kb downstream 7731 true Chr04: 42857750-42865480 Glycine max
Glyma.04G171700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42857750-42862749 Glycine max
Glyma.04G171700 10.0kb upstream 10.0kb upstream 12731 true Chr04: 42862750-42875480 Glycine max
Glyma.04G171700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42865481-42875480 Glycine max
Glyma.04G171700 10.0kb downstream 10.0kb downstream 12731 true Chr04: 42852750-42865480 Glycine max
Glyma.04G171700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42852750-42862749 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312546 5265 Fabidae View MSA
124065847 5270 Rosid View MSA
123748734 5271 Pentapetalae View MSA
122797701 5272 Eudicot View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.99166 0.0 26.307    
cufflinks 9.25482 0.0 26.9437    
cufflinks 2.84347 0.0 9.69177   Low
cufflinks 6.7178 0.0 20.3994    
cufflinks 12.9729 0.0 36.3493    
cufflinks 8.75356 0.0 25.6756    
cufflinks 16.786 0.0 46.0357   High
cufflinks 8.03264 0.0 23.7824    
cufflinks 10.9278 0.0 31.1374    
cufflinks 2.13        
cufflinks 2.672        
cufflinks 2.277        
cufflinks 6.726       High
cufflinks 8.547     High High
cufflinks 2.423        
cufflinks 1.162        
cufflinks 1.685        
cufflinks 2.304        
cufflinks 2.755        
cufflinks 0.783       Low
cufflinks 2.372        
cufflinks 0.942       Low
cufflinks 1.501        
cufflinks 2.252        
cufflinks 0.983       Low
cufflinks 3.05        

0 Strain