Gene : Glyma.04G168300 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Genomic Order:  1683
Name:  ? Glyma.04G168300 Secondary Identifier:  ? PAC:30488521
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G168300 0.5kb upstream 0.5kb upstream 3815 true Chr04: 42191074-42194888 Glycine max
Glyma.04G168300 0.5kb upstream 0.5kb upstream 500 false Chr04: 42194389-42194888 Glycine max
Glyma.04G168300 0.5kb downstream 0.5kb downstream 3815 true Chr04: 42190574-42194388 Glycine max
Glyma.04G168300 0.5kb downstream 0.5kb downstream 500 false Chr04: 42190574-42191073 Glycine max
Glyma.04G168300 1.0kb upstream 1.0kb upstream 4315 true Chr04: 42191074-42195388 Glycine max
Glyma.04G168300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 42194389-42195388 Glycine max
Glyma.04G168300 1.0kb downstream 1.0kb downstream 4315 true Chr04: 42190074-42194388 Glycine max
Glyma.04G168300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 42190074-42191073 Glycine max
Glyma.04G168300 2.0kb upstream 2.0kb upstream 5315 true Chr04: 42191074-42196388 Glycine max
Glyma.04G168300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 42194389-42196388 Glycine max
Glyma.04G168300 2.0kb downstream 2.0kb downstream 5315 true Chr04: 42189074-42194388 Glycine max
Glyma.04G168300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 42189074-42191073 Glycine max
Glyma.04G168300 5.0kb upstream 5.0kb upstream 8315 true Chr04: 42191074-42199388 Glycine max
Glyma.04G168300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 42194389-42199388 Glycine max
Glyma.04G168300 5.0kb downstream 5.0kb downstream 8315 true Chr04: 42186074-42194388 Glycine max
Glyma.04G168300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 42186074-42191073 Glycine max
Glyma.04G168300 10.0kb upstream 10.0kb upstream 13315 true Chr04: 42191074-42204388 Glycine max
Glyma.04G168300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 42194389-42204388 Glycine max
Glyma.04G168300 10.0kb downstream 10.0kb downstream 13315 true Chr04: 42181074-42194388 Glycine max
Glyma.04G168300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42181074-42191073 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311132 5265 Fabidae View MSA
124066324 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7909 0.0 44.951   High
cufflinks 2.98994 0.0 8.89715    
cufflinks 4.27655 0.0 12.1958    
cufflinks 5.53009 0.0 15.2899    
cufflinks 0.931833 0.0 3.21671    
cufflinks 0.794831 0.0 2.7896   Low
cufflinks 2.12263 0.0 6.60354    
cufflinks 2.30436 0.0 7.07502    
cufflinks 0.843416 0.0 2.94524   Low
cufflinks 2.096        
cufflinks 0.613        
cufflinks 2.193        
cufflinks 0.541        
cufflinks 0.158       Low
cufflinks 1.308        
cufflinks 10.994     High High
cufflinks 0.487       Low
cufflinks 1.475        
cufflinks 3.678        
cufflinks 4.413        
cufflinks 0.656        
cufflinks 8.004     High High
cufflinks 5.699        
cufflinks 0.637        
cufflinks 8.872     High High
cufflinks 1.412        

0 Strain