Gene : Glyma.04G162700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10000//PTHR10000:SF13 - PHOSPHOSERINE PHOSPHATASE Genomic Order:  1627
Name:  ? Glyma.04G162700 Secondary Identifier:  ? PAC:30491181
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax SER-GLYSYN-PWY Glycine max pathologic  
Gmax SERSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G162700 0.5kb upstream 0.5kb upstream 5119 true Chr04: 40326865-40331983 Glycine max
Glyma.04G162700 0.5kb upstream 0.5kb upstream 500 false Chr04: 40331484-40331983 Glycine max
Glyma.04G162700 0.5kb downstream 0.5kb downstream 5119 true Chr04: 40326365-40331483 Glycine max
Glyma.04G162700 0.5kb downstream 0.5kb downstream 500 false Chr04: 40326365-40326864 Glycine max
Glyma.04G162700 1.0kb upstream 1.0kb upstream 5619 true Chr04: 40326865-40332483 Glycine max
Glyma.04G162700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 40331484-40332483 Glycine max
Glyma.04G162700 1.0kb downstream 1.0kb downstream 5619 true Chr04: 40325865-40331483 Glycine max
Glyma.04G162700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 40325865-40326864 Glycine max
Glyma.04G162700 2.0kb upstream 2.0kb upstream 6619 true Chr04: 40326865-40333483 Glycine max
Glyma.04G162700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 40331484-40333483 Glycine max
Glyma.04G162700 2.0kb downstream 2.0kb downstream 6619 true Chr04: 40324865-40331483 Glycine max
Glyma.04G162700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 40324865-40326864 Glycine max
Glyma.04G162700 5.0kb upstream 5.0kb upstream 9619 true Chr04: 40326865-40336483 Glycine max
Glyma.04G162700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 40331484-40336483 Glycine max
Glyma.04G162700 5.0kb downstream 5.0kb downstream 9619 true Chr04: 40321865-40331483 Glycine max
Glyma.04G162700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 40321865-40326864 Glycine max
Glyma.04G162700 10.0kb upstream 10.0kb upstream 14619 true Chr04: 40326865-40341483 Glycine max
Glyma.04G162700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 40331484-40341483 Glycine max
Glyma.04G162700 10.0kb downstream 10.0kb downstream 14619 true Chr04: 40316865-40331483 Glycine max
Glyma.04G162700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 40316865-40326864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300897 5265 Fabidae View MSA
124065988 5270 Rosid View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.90037 0.0 25.4157   Low
cufflinks 8.28666 0.0 36.5684    
cufflinks 3.60178 0.0 22.0516   Low
cufflinks 9.9941 0.0 46.3309    
cufflinks 10.3371 0.0 46.8043    
cufflinks 9.49191 0.0 40.1638    
cufflinks 7.84974 0.0 35.0046    
cufflinks 12.628 0.0 54.7929   High
cufflinks 9.45427 0.0 44.3036    
cufflinks 1.372       High
cufflinks 0.137       Low
cufflinks 0.527        
cufflinks 0.994       High
cufflinks 1.392       High
cufflinks 0.385        
cufflinks 0.484        
cufflinks 0.571        
cufflinks 0.962       High
cufflinks 0.797        
cufflinks 0.475        
cufflinks 0.228       Low
cufflinks 0.497        
cufflinks 0.49        
cufflinks 0.233       Low
cufflinks 0.465        
cufflinks 0.388        

0 Strain