Gene : Glyma.04G186200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14281:SF0 - KINETOCHORE PROTEIN SPC25 Genomic Order:  1862
Name:  ? Glyma.04G186200 Secondary Identifier:  ? PAC:30489820
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G186200 0.5kb upstream 0.5kb upstream 6903 true Chr04: 45622031-45628933 Glycine max
Glyma.04G186200 0.5kb upstream 0.5kb upstream 500 false Chr04: 45622031-45622530 Glycine max
Glyma.04G186200 0.5kb downstream 0.5kb downstream 6903 true Chr04: 45622531-45629433 Glycine max
Glyma.04G186200 0.5kb downstream 0.5kb downstream 500 false Chr04: 45628934-45629433 Glycine max
Glyma.04G186200 1.0kb upstream 1.0kb upstream 7403 true Chr04: 45621531-45628933 Glycine max
Glyma.04G186200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45621531-45622530 Glycine max
Glyma.04G186200 1.0kb downstream 1.0kb downstream 7403 true Chr04: 45622531-45629933 Glycine max
Glyma.04G186200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45628934-45629933 Glycine max
Glyma.04G186200 2.0kb upstream 2.0kb upstream 8403 true Chr04: 45620531-45628933 Glycine max
Glyma.04G186200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45620531-45622530 Glycine max
Glyma.04G186200 2.0kb downstream 2.0kb downstream 8403 true Chr04: 45622531-45630933 Glycine max
Glyma.04G186200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45628934-45630933 Glycine max
Glyma.04G186200 5.0kb upstream 5.0kb upstream 11403 true Chr04: 45617531-45628933 Glycine max
Glyma.04G186200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45617531-45622530 Glycine max
Glyma.04G186200 5.0kb downstream 5.0kb downstream 11403 true Chr04: 45622531-45633933 Glycine max
Glyma.04G186200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45628934-45633933 Glycine max
Glyma.04G186200 10.0kb upstream 10.0kb upstream 16403 true Chr04: 45612531-45628933 Glycine max
Glyma.04G186200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45612531-45622530 Glycine max
Glyma.04G186200 10.0kb downstream 10.0kb downstream 16403 true Chr04: 45622531-45638933 Glycine max
Glyma.04G186200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45628934-45638933 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253752 5265 Fabidae View MSA
124060731 5270 Rosid View MSA
123740734 5271 Pentapetalae View MSA
122790500 5272 Eudicot View MSA
122047601 5273 Angiosperm View MSA
121348266 5274 Embryophyte View MSA
123424992 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.10754 0.0 7.63879   Low
cufflinks 4.96643 0.0 20.3795   High
cufflinks 1.64734 0.0 9.30709    
cufflinks 2.08122 0.0 11.1569    
cufflinks 2.64723 0.0 15.5912    
cufflinks 2.58855 0.0 13.1423    
cufflinks 1.80226 0.0 11.955    
cufflinks 3.04867 0.0 16.6844    
cufflinks 3.31121 0.0 15.5122    
cufflinks 0.208        
cufflinks 0.098       Low
cufflinks 0.24        
cufflinks 0.372       High
cufflinks 0.33        
cufflinks 0.04     Low Low
cufflinks 0.289        
cufflinks 0.08       Low
cufflinks 0.226        
cufflinks 0.366       High
cufflinks 0.253        
cufflinks 0.098       Low
cufflinks 0.262        
cufflinks 0.37       High
cufflinks 0.122        
cufflinks 0.244        
cufflinks 0.125        

0 Strain