Gene : Glyma.04G177600 G. max Wm82.a2.v1
Defline:  (1 of 2) PF02985//PF13513 - HEAT repeat (HEAT) // HEAT-like repeat (HEAT_EZ) Genomic Order:  1776
Name:  ? Glyma.04G177600 Secondary Identifier:  ? PAC:30489997
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G177600 0.5kb upstream 0.5kb upstream 6393 true Chr04: 44155252-44161644 Glycine max
Glyma.04G177600 0.5kb upstream 0.5kb upstream 500 false Chr04: 44161145-44161644 Glycine max
Glyma.04G177600 0.5kb downstream 0.5kb downstream 6393 true Chr04: 44154752-44161144 Glycine max
Glyma.04G177600 0.5kb downstream 0.5kb downstream 500 false Chr04: 44154752-44155251 Glycine max
Glyma.04G177600 1.0kb upstream 1.0kb upstream 6893 true Chr04: 44155252-44162144 Glycine max
Glyma.04G177600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44161145-44162144 Glycine max
Glyma.04G177600 1.0kb downstream 1.0kb downstream 6893 true Chr04: 44154252-44161144 Glycine max
Glyma.04G177600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44154252-44155251 Glycine max
Glyma.04G177600 2.0kb upstream 2.0kb upstream 7893 true Chr04: 44155252-44163144 Glycine max
Glyma.04G177600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44161145-44163144 Glycine max
Glyma.04G177600 2.0kb downstream 2.0kb downstream 7893 true Chr04: 44153252-44161144 Glycine max
Glyma.04G177600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44153252-44155251 Glycine max
Glyma.04G177600 5.0kb upstream 5.0kb upstream 10893 true Chr04: 44155252-44166144 Glycine max
Glyma.04G177600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44161145-44166144 Glycine max
Glyma.04G177600 5.0kb downstream 5.0kb downstream 10893 true Chr04: 44150252-44161144 Glycine max
Glyma.04G177600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44150252-44155251 Glycine max
Glyma.04G177600 10.0kb upstream 10.0kb upstream 15893 true Chr04: 44155252-44171144 Glycine max
Glyma.04G177600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44161145-44171144 Glycine max
Glyma.04G177600 10.0kb downstream 10.0kb downstream 15893 true Chr04: 44145252-44161144 Glycine max
Glyma.04G177600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44145252-44155251 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122311359 5265 Fabidae View MSA
124069706 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.80255 0.0 7.18787   Low
cufflinks 8.19352 0.0 25.0578    
cufflinks 1.7686 0.0 7.14396   Low
cufflinks 18.3567 0.0 57.6466   High
cufflinks 6.42283 0.0 20.2422    
cufflinks 6.63298 0.0 21.3565    
cufflinks 9.70972 0.0 33.1076    
cufflinks 10.7211 0.0 32.4393    
cufflinks 4.05785 0.0 13.4642    
cufflinks 3.283        
cufflinks 0.199       Low
cufflinks 1.194        
cufflinks 1.797        
cufflinks 1.118        
cufflinks 0.181       Low
cufflinks 3.321        
cufflinks 1.18        
cufflinks 3.999       High
cufflinks 2.297        
cufflinks 2.704        
cufflinks 0.642        
cufflinks 3.003        
cufflinks 2.233        
cufflinks 0.323       Low
cufflinks 2.905        
cufflinks 0.626        

0 Strain