Gene : Glyma.04G001800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  18
Name:  ? Glyma.04G001800 Secondary Identifier:  ? PAC:30488988
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G001800 0.5kb upstream 0.5kb upstream 10624 true Chr04: 145071-155694 Glycine max
Glyma.04G001800 0.5kb upstream 0.5kb upstream 500 false Chr04: 145071-145570 Glycine max
Glyma.04G001800 0.5kb downstream 0.5kb downstream 10624 true Chr04: 145571-156194 Glycine max
Glyma.04G001800 0.5kb downstream 0.5kb downstream 500 false Chr04: 155695-156194 Glycine max
Glyma.04G001800 1.0kb upstream 1.0kb upstream 11124 true Chr04: 144571-155694 Glycine max
Glyma.04G001800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 144571-145570 Glycine max
Glyma.04G001800 1.0kb downstream 1.0kb downstream 11124 true Chr04: 145571-156694 Glycine max
Glyma.04G001800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 155695-156694 Glycine max
Glyma.04G001800 2.0kb upstream 2.0kb upstream 12124 true Chr04: 143571-155694 Glycine max
Glyma.04G001800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 143571-145570 Glycine max
Glyma.04G001800 2.0kb downstream 2.0kb downstream 12124 true Chr04: 145571-157694 Glycine max
Glyma.04G001800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 155695-157694 Glycine max
Glyma.04G001800 5.0kb upstream 5.0kb upstream 15124 true Chr04: 140571-155694 Glycine max
Glyma.04G001800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 140571-145570 Glycine max
Glyma.04G001800 5.0kb downstream 5.0kb downstream 15124 true Chr04: 145571-160694 Glycine max
Glyma.04G001800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 155695-160694 Glycine max
Glyma.04G001800 10.0kb upstream 10.0kb upstream 20124 true Chr04: 135571-155694 Glycine max
Glyma.04G001800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 135571-145570 Glycine max
Glyma.04G001800 10.0kb downstream 10.0kb downstream 20124 true Chr04: 145571-165694 Glycine max
Glyma.04G001800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 155695-165694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250327 5265 Fabidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32918 0.0 31.2315   High
cufflinks 2.01552 0.0 35.8607    
cufflinks 3.43892 0.0 40.2935   High
cufflinks 1.96732 0.0 23.9603    
cufflinks 0.807003 0.0 24.0779   Low
cufflinks 2.04375 0.0 29.1293    
cufflinks 2.85837 0.0 37.6477    
cufflinks 1.66001 0.0 27.599    
cufflinks 2.56508 0.0 32.3885    
cufflinks 0.031     Low  
cufflinks 0.029     Low  
cufflinks 0.113     Low  
cufflinks 0.019     Low Low
cufflinks 0.025     Low  
cufflinks 0.077        
cufflinks 0.107        
cufflinks 0.015     Low Low
cufflinks 0.126       High
cufflinks 0.083     Low  
cufflinks 0.144       High
cufflinks 0.02     Low Low
cufflinks 0.135       High
cufflinks 0.116        
cufflinks 0.034     Low  
cufflinks 0.131       High
cufflinks 0.016     Low Low

0 Strain