Gene : Glyma.04G002200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11807:SF12 - CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 Genomic Order:  22
Name:  ? Glyma.04G002200 Secondary Identifier:  ? PAC:30489507
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G002200 0.5kb upstream 0.5kb upstream 2359 true Chr04: 186700-189058 Glycine max
Glyma.04G002200 0.5kb upstream 0.5kb upstream 500 false Chr04: 188559-189058 Glycine max
Glyma.04G002200 0.5kb downstream 0.5kb downstream 2359 true Chr04: 186200-188558 Glycine max
Glyma.04G002200 0.5kb downstream 0.5kb downstream 500 false Chr04: 186200-186699 Glycine max
Glyma.04G002200 1.0kb upstream 1.0kb upstream 2859 true Chr04: 186700-189558 Glycine max
Glyma.04G002200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 188559-189558 Glycine max
Glyma.04G002200 1.0kb downstream 1.0kb downstream 2859 true Chr04: 185700-188558 Glycine max
Glyma.04G002200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 185700-186699 Glycine max
Glyma.04G002200 2.0kb upstream 2.0kb upstream 3859 true Chr04: 186700-190558 Glycine max
Glyma.04G002200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 188559-190558 Glycine max
Glyma.04G002200 2.0kb downstream 2.0kb downstream 3859 true Chr04: 184700-188558 Glycine max
Glyma.04G002200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 184700-186699 Glycine max
Glyma.04G002200 5.0kb upstream 5.0kb upstream 6859 true Chr04: 186700-193558 Glycine max
Glyma.04G002200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 188559-193558 Glycine max
Glyma.04G002200 5.0kb downstream 5.0kb downstream 6859 true Chr04: 181700-188558 Glycine max
Glyma.04G002200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 181700-186699 Glycine max
Glyma.04G002200 10.0kb upstream 10.0kb upstream 11859 true Chr04: 186700-198558 Glycine max
Glyma.04G002200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 188559-198558 Glycine max
Glyma.04G002200 10.0kb downstream 10.0kb downstream 11859 true Chr04: 176700-188558 Glycine max
Glyma.04G002200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 176700-186699 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302753 5265 Fabidae View MSA
124064054 5270 Rosid View MSA
123742084 5271 Pentapetalae View MSA
122790612 5272 Eudicot View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9254 0.0 79.3242    
cufflinks 16.5915 0.0 63.3185    
cufflinks 10.4059 0.0 42.0206   Low
cufflinks 16.7411 0.0 63.9371    
cufflinks 21.4145 0.0 81.2744 High  
cufflinks 11.6819 0.0 46.1051    
cufflinks 38.598 0.0 152.542 High High
cufflinks 13.3 0.0 51.8456    
cufflinks 15.0553 0.0 57.8466    
cufflinks 3.298       Low
cufflinks 2.861       Low
cufflinks 4.417        
cufflinks 4.355        
cufflinks 6.555       High
cufflinks 3.328        
cufflinks 5.097        
cufflinks 3.079       Low
cufflinks 4.728        
cufflinks 5.511       High
cufflinks 5.066        
cufflinks 3.681        
cufflinks 5.112        
cufflinks 4.122        
cufflinks 3.883        
cufflinks 5.01        
cufflinks 3.211       Low

0 Strain