Gene : Glyma.04G000400 G. max Wm82.a2.v1

Defline:  (1 of 2) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Genomic Order:  4
Name:  ? Glyma.04G000400 Secondary Identifier:  ? PAC:30489829

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7426 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G000400 0.5kb upstream 0.5kb upstream 15003 true Chr04: 52894-67896 Glycine max
Glyma.04G000400 0.5kb upstream 0.5kb upstream 500 false Chr04: 67397-67896 Glycine max
Glyma.04G000400 0.5kb downstream 0.5kb downstream 15003 true Chr04: 52394-67396 Glycine max
Glyma.04G000400 0.5kb downstream 0.5kb downstream 500 false Chr04: 52394-52893 Glycine max
Glyma.04G000400 1.0kb upstream 1.0kb upstream 15503 true Chr04: 52894-68396 Glycine max
Glyma.04G000400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67397-68396 Glycine max
Glyma.04G000400 1.0kb downstream 1.0kb downstream 15503 true Chr04: 51894-67396 Glycine max
Glyma.04G000400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51894-52893 Glycine max
Glyma.04G000400 2.0kb upstream 2.0kb upstream 16503 true Chr04: 52894-69396 Glycine max
Glyma.04G000400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67397-69396 Glycine max
Glyma.04G000400 2.0kb downstream 2.0kb downstream 16503 true Chr04: 50894-67396 Glycine max
Glyma.04G000400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50894-52893 Glycine max
Glyma.04G000400 5.0kb upstream 5.0kb upstream 19503 true Chr04: 52894-72396 Glycine max
Glyma.04G000400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67397-72396 Glycine max
Glyma.04G000400 5.0kb downstream 5.0kb downstream 19503 true Chr04: 47894-67396 Glycine max
Glyma.04G000400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 47894-52893 Glycine max
Glyma.04G000400 10.0kb upstream 10.0kb upstream 24503 true Chr04: 52894-77396 Glycine max
Glyma.04G000400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67397-77396 Glycine max
Glyma.04G000400 10.0kb downstream 10.0kb downstream 24503 true Chr04: 42894-67396 Glycine max
Glyma.04G000400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 42894-52893 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304113 5265 Fabidae View MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9128 0.0 63.1492    
cufflinks 17.778 0.0 70.6861    
cufflinks 19.5554 0.0 80.1097    
cufflinks 16.4037 0.0 63.2016    
cufflinks 14.3806 0.0 58.2875    
cufflinks 18.7153 0.0 81.3236    
cufflinks 20.9707 0.0 81.2273   High
cufflinks 11.9129 0.0 53.3804   Low
cufflinks 17.2884 0.0 75.324    
cufflinks 0.768        
cufflinks 0.362       Low
cufflinks 1.196       High
cufflinks 0.955        
cufflinks 0.932        
cufflinks 0.393       Low
cufflinks 0.952        
cufflinks 0.439       Low
cufflinks 1.4       High
cufflinks 1.031        
cufflinks 0.95        
cufflinks 0.479       Low
cufflinks 1.042        
cufflinks 0.97        
cufflinks 0.564        
cufflinks 0.923        
cufflinks 0.616        

0 Strain