Gene : Glyma.19G125800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32518:SF3 - 4-ALPHA-GLUCANOTRANSFERASE DPE2 Genomic Order:  1258
Name:  ? Glyma.19G125800 Secondary Identifier:  ? PAC:30512331
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6724 Glycine max pathologic  
Gmax PWY-7238 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G125800 0.5kb upstream 0.5kb upstream 13390 true Chr19: 38410142-38423531 Glycine max
Glyma.19G125800 0.5kb upstream 0.5kb upstream 500 false Chr19: 38410142-38410641 Glycine max
Glyma.19G125800 0.5kb downstream 0.5kb downstream 13390 true Chr19: 38410642-38424031 Glycine max
Glyma.19G125800 0.5kb downstream 0.5kb downstream 500 false Chr19: 38423532-38424031 Glycine max
Glyma.19G125800 1.0kb upstream 1.0kb upstream 13890 true Chr19: 38409642-38423531 Glycine max
Glyma.19G125800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38409642-38410641 Glycine max
Glyma.19G125800 1.0kb downstream 1.0kb downstream 13890 true Chr19: 38410642-38424531 Glycine max
Glyma.19G125800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38423532-38424531 Glycine max
Glyma.19G125800 2.0kb upstream 2.0kb upstream 14890 true Chr19: 38408642-38423531 Glycine max
Glyma.19G125800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38408642-38410641 Glycine max
Glyma.19G125800 2.0kb downstream 2.0kb downstream 14890 true Chr19: 38410642-38425531 Glycine max
Glyma.19G125800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38423532-38425531 Glycine max
Glyma.19G125800 5.0kb upstream 5.0kb upstream 17890 true Chr19: 38405642-38423531 Glycine max
Glyma.19G125800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38405642-38410641 Glycine max
Glyma.19G125800 5.0kb downstream 5.0kb downstream 17890 true Chr19: 38410642-38428531 Glycine max
Glyma.19G125800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38423532-38428531 Glycine max
Glyma.19G125800 10.0kb upstream 10.0kb upstream 22890 true Chr19: 38400642-38423531 Glycine max
Glyma.19G125800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38400642-38410641 Glycine max
Glyma.19G125800 10.0kb downstream 10.0kb downstream 22890 true Chr19: 38410642-38433531 Glycine max
Glyma.19G125800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38423532-38433531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310659 5265 Fabidae View MSA
124066396 5270 Rosid View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.1256 0.0 112.067 High High
cufflinks 13.0093 0.0 35.0958    
cufflinks 11.2574 0.0 30.2207    
cufflinks 16.2521 0.0 44.4836    
cufflinks 10.3871 0.0 27.7847    
cufflinks 10.9727 0.0 29.4115    
cufflinks 28.407 0.0 82.2015 High High
cufflinks 15.7956 0.0 43.1404    
cufflinks 10.8226 0.0 28.9895    
cufflinks 2.74        
cufflinks 0.493       Low
cufflinks 3.432        
cufflinks 3.444        
cufflinks 4.169        
cufflinks 1.432        
cufflinks 5.037        
cufflinks 1.49        
cufflinks 4.924        
cufflinks 3.814        
cufflinks 9.513     High High
cufflinks 0.75       Low
cufflinks 8.12     High High
cufflinks 6.491        
cufflinks 0.579       Low
cufflinks 6.852        
cufflinks 1.09        

0 Strain