Gene : Glyma.19G125900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15245:SF23 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1-RELATED Genomic Order:  1259
Name:  ? Glyma.19G125900 Secondary Identifier:  ? PAC:30511628
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G125900 0.5kb upstream 0.5kb upstream 4163 true Chr19: 38424243-38428405 Glycine max
Glyma.19G125900 0.5kb upstream 0.5kb upstream 500 false Chr19: 38424243-38424742 Glycine max
Glyma.19G125900 0.5kb downstream 0.5kb downstream 4163 true Chr19: 38424743-38428905 Glycine max
Glyma.19G125900 0.5kb downstream 0.5kb downstream 500 false Chr19: 38428406-38428905 Glycine max
Glyma.19G125900 1.0kb upstream 1.0kb upstream 4663 true Chr19: 38423743-38428405 Glycine max
Glyma.19G125900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38423743-38424742 Glycine max
Glyma.19G125900 1.0kb downstream 1.0kb downstream 4663 true Chr19: 38424743-38429405 Glycine max
Glyma.19G125900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38428406-38429405 Glycine max
Glyma.19G125900 2.0kb upstream 2.0kb upstream 5663 true Chr19: 38422743-38428405 Glycine max
Glyma.19G125900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38422743-38424742 Glycine max
Glyma.19G125900 2.0kb downstream 2.0kb downstream 5663 true Chr19: 38424743-38430405 Glycine max
Glyma.19G125900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38428406-38430405 Glycine max
Glyma.19G125900 5.0kb upstream 5.0kb upstream 8663 true Chr19: 38419743-38428405 Glycine max
Glyma.19G125900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38419743-38424742 Glycine max
Glyma.19G125900 5.0kb downstream 5.0kb downstream 8663 true Chr19: 38424743-38433405 Glycine max
Glyma.19G125900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38428406-38433405 Glycine max
Glyma.19G125900 10.0kb upstream 10.0kb upstream 13663 true Chr19: 38414743-38428405 Glycine max
Glyma.19G125900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38414743-38424742 Glycine max
Glyma.19G125900 10.0kb downstream 10.0kb downstream 13663 true Chr19: 38424743-38438405 Glycine max
Glyma.19G125900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38428406-38438405 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028211 5273 Angiosperm View MSA
122312461 5265 Fabidae View MSA
124066276 5270 Rosid View MSA
123740399 5271 Pentapetalae View MSA
122769978 5272 Eudicot View MSA
123429040 5275 Viridiplantae View MSA
121297732 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0426246 0.0 0.173899 Low  
cufflinks 8.36803 0.0 22.7976   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00937319 0.0 0.043062 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0482877 0.0 0.195875 Low  
cufflinks 0.0215061 0.0 0.0917063 Low  
cufflinks 0.226887 0.0 0.864653 Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.495       High
cufflinks 0.026     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.708       High
cufflinks 0.032     Low  
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.087     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain