Gene : Glyma.19G126500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24006:SF520 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  1265
Name:  ? Glyma.19G126500 Secondary Identifier:  ? PAC:30514847
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G126500 0.5kb upstream 0.5kb upstream 13248 true Chr19: 38503103-38516350 Glycine max
Glyma.19G126500 0.5kb upstream 0.5kb upstream 500 false Chr19: 38515851-38516350 Glycine max
Glyma.19G126500 0.5kb downstream 0.5kb downstream 13248 true Chr19: 38502603-38515850 Glycine max
Glyma.19G126500 0.5kb downstream 0.5kb downstream 500 false Chr19: 38502603-38503102 Glycine max
Glyma.19G126500 1.0kb upstream 1.0kb upstream 13748 true Chr19: 38503103-38516850 Glycine max
Glyma.19G126500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38515851-38516850 Glycine max
Glyma.19G126500 1.0kb downstream 1.0kb downstream 13748 true Chr19: 38502103-38515850 Glycine max
Glyma.19G126500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38502103-38503102 Glycine max
Glyma.19G126500 2.0kb upstream 2.0kb upstream 14748 true Chr19: 38503103-38517850 Glycine max
Glyma.19G126500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38515851-38517850 Glycine max
Glyma.19G126500 2.0kb downstream 2.0kb downstream 14748 true Chr19: 38501103-38515850 Glycine max
Glyma.19G126500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38501103-38503102 Glycine max
Glyma.19G126500 5.0kb upstream 5.0kb upstream 17748 true Chr19: 38503103-38520850 Glycine max
Glyma.19G126500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38515851-38520850 Glycine max
Glyma.19G126500 5.0kb downstream 5.0kb downstream 17748 true Chr19: 38498103-38515850 Glycine max
Glyma.19G126500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38498103-38503102 Glycine max
Glyma.19G126500 10.0kb upstream 10.0kb upstream 22748 true Chr19: 38503103-38525850 Glycine max
Glyma.19G126500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38515851-38525850 Glycine max
Glyma.19G126500 10.0kb downstream 10.0kb downstream 22748 true Chr19: 38493103-38515850 Glycine max
Glyma.19G126500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38493103-38503102 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302403 5265 Fabidae View MSA
124064988 5270 Rosid View MSA
123740108 5271 Pentapetalae View MSA
122790123 5272 Eudicot View MSA
122043938 5273 Angiosperm View MSA
121310212 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.07923 0.0 11.2925   Low
cufflinks 8.46544 0.0 22.603    
cufflinks 5.44476 0.0 14.7439    
cufflinks 8.07565 0.0 21.575    
cufflinks 5.82375 0.0 15.7408    
cufflinks 4.70526 0.0 12.8749   Low
cufflinks 11.3637 0.0 30.3516   High
cufflinks 6.20838 0.0 16.716    
cufflinks 6.62907 0.0 17.8058    
cufflinks 1.574        
cufflinks 0.972       Low
cufflinks 1.946        
cufflinks 1.733        
cufflinks 1.915        
cufflinks 1.102       Low
cufflinks 1.963        
cufflinks 1.091       Low
cufflinks 2.193       High
cufflinks 2.581       High
cufflinks 1.848        
cufflinks 1.149        
cufflinks 1.857        
cufflinks 2.018        
cufflinks 0.887       Low
cufflinks 1.803        
cufflinks 1.25        

0 Strain