Gene : Glyma.04G003900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23421:SF52 - BETA-GALACTOSIDASE 11-RELATED Genomic Order:  39
Name:  ? Glyma.04G003900 Secondary Identifier:  ? PAC:30488877
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G003900 0.5kb upstream 0.5kb upstream 3525 true Chr04: 318439-321963 Glycine max
Glyma.04G003900 0.5kb upstream 0.5kb upstream 500 false Chr04: 318439-318938 Glycine max
Glyma.04G003900 0.5kb downstream 0.5kb downstream 3525 true Chr04: 318939-322463 Glycine max
Glyma.04G003900 0.5kb downstream 0.5kb downstream 500 false Chr04: 321964-322463 Glycine max
Glyma.04G003900 1.0kb upstream 1.0kb upstream 4025 true Chr04: 317939-321963 Glycine max
Glyma.04G003900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 317939-318938 Glycine max
Glyma.04G003900 1.0kb downstream 1.0kb downstream 4025 true Chr04: 318939-322963 Glycine max
Glyma.04G003900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 321964-322963 Glycine max
Glyma.04G003900 2.0kb upstream 2.0kb upstream 5025 true Chr04: 316939-321963 Glycine max
Glyma.04G003900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 316939-318938 Glycine max
Glyma.04G003900 2.0kb downstream 2.0kb downstream 5025 true Chr04: 318939-323963 Glycine max
Glyma.04G003900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 321964-323963 Glycine max
Glyma.04G003900 5.0kb upstream 5.0kb upstream 8025 true Chr04: 313939-321963 Glycine max
Glyma.04G003900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 313939-318938 Glycine max
Glyma.04G003900 5.0kb downstream 5.0kb downstream 8025 true Chr04: 318939-326963 Glycine max
Glyma.04G003900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 321964-326963 Glycine max
Glyma.04G003900 10.0kb upstream 10.0kb upstream 13025 true Chr04: 308939-321963 Glycine max
Glyma.04G003900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 308939-318938 Glycine max
Glyma.04G003900 10.0kb downstream 10.0kb downstream 13025 true Chr04: 318939-331963 Glycine max
Glyma.04G003900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 321964-331963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310069 5265 Fabidae View MSA
124073107 5270 Rosid View MSA
123750727 5271 Pentapetalae View MSA
122791084 5272 Eudicot View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 194.224 0.0 834.528 High High
cufflinks 0.0376958 0.0 0.151487 Low  
cufflinks 0.0113579 0.0 0.0490424 Low  
cufflinks 0.025437 0.0 0.104 Low  
cufflinks 0.00591487 0.0 0.0270913 Low  
cufflinks 0.509142 0.0 1.81275    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 68.399     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 94.941     High High
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain