Gene : Glyma.19G126900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR15672:SF15 - EXPRESSED PROTEIN Genomic Order:  1269
Name:  ? Glyma.19G126900 Secondary Identifier:  ? PAC:30513700
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G126900 0.5kb upstream 0.5kb upstream 4380 true Chr19: 38554830-38559209 Glycine max
Glyma.19G126900 0.5kb upstream 0.5kb upstream 500 false Chr19: 38554830-38555329 Glycine max
Glyma.19G126900 0.5kb downstream 0.5kb downstream 4380 true Chr19: 38555330-38559709 Glycine max
Glyma.19G126900 0.5kb downstream 0.5kb downstream 500 false Chr19: 38559210-38559709 Glycine max
Glyma.19G126900 1.0kb upstream 1.0kb upstream 4880 true Chr19: 38554330-38559209 Glycine max
Glyma.19G126900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38554330-38555329 Glycine max
Glyma.19G126900 1.0kb downstream 1.0kb downstream 4880 true Chr19: 38555330-38560209 Glycine max
Glyma.19G126900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38559210-38560209 Glycine max
Glyma.19G126900 2.0kb upstream 2.0kb upstream 5880 true Chr19: 38553330-38559209 Glycine max
Glyma.19G126900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38553330-38555329 Glycine max
Glyma.19G126900 2.0kb downstream 2.0kb downstream 5880 true Chr19: 38555330-38561209 Glycine max
Glyma.19G126900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38559210-38561209 Glycine max
Glyma.19G126900 5.0kb upstream 5.0kb upstream 8880 true Chr19: 38550330-38559209 Glycine max
Glyma.19G126900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38550330-38555329 Glycine max
Glyma.19G126900 5.0kb downstream 5.0kb downstream 8880 true Chr19: 38555330-38564209 Glycine max
Glyma.19G126900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38559210-38564209 Glycine max
Glyma.19G126900 10.0kb upstream 10.0kb upstream 13880 true Chr19: 38545330-38559209 Glycine max
Glyma.19G126900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38545330-38555329 Glycine max
Glyma.19G126900 10.0kb downstream 10.0kb downstream 13880 true Chr19: 38555330-38569209 Glycine max
Glyma.19G126900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38559210-38569209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299184 5265 Fabidae View MSA
124070671 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.3628 0.0 253.335 High High
cufflinks 54.6025 0.0 153.181 High  
cufflinks 81.4725 0.0 241.947 High High
cufflinks 51.2848 0.0 142.989 High  
cufflinks 45.1627 0.0 124.164 High  
cufflinks 37.156 0.0 100.857 High Low
cufflinks 47.967 0.0 132.424 High  
cufflinks 40.593 0.0 110.89 High  
cufflinks 59.4098 0.0 168.258 High  
cufflinks 27.243     High  
cufflinks 69.086     High High
cufflinks 30.915     High  
cufflinks 11.634     High Low
cufflinks 11.82     High Low
cufflinks 40.778     High  
cufflinks 42.967     High  
cufflinks 44.977     High  
cufflinks 24.402     High  
cufflinks 21.561     High  
cufflinks 57.006     High  
cufflinks 46.431     High  
cufflinks 55.81     High  
cufflinks 40.776     High  
cufflinks 51.979     High  
cufflinks 47.317     High  
cufflinks 33.366     High  

0 Strain