Gene : Glyma.04G017500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11465 - CATALASE Genomic Order:  175
Name:  ? Glyma.04G017500 Secondary Identifier:  ? PAC:30490485
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY Glycine max pathologic  
Gmax DETOX1-PWY-1 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G017500 0.5kb upstream 0.5kb upstream 5292 true Chr04: 1365544-1370835 Glycine max
Glyma.04G017500 0.5kb upstream 0.5kb upstream 500 false Chr04: 1370336-1370835 Glycine max
Glyma.04G017500 0.5kb downstream 0.5kb downstream 5292 true Chr04: 1365044-1370335 Glycine max
Glyma.04G017500 0.5kb downstream 0.5kb downstream 500 false Chr04: 1365044-1365543 Glycine max
Glyma.04G017500 1.0kb upstream 1.0kb upstream 5792 true Chr04: 1365544-1371335 Glycine max
Glyma.04G017500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1370336-1371335 Glycine max
Glyma.04G017500 1.0kb downstream 1.0kb downstream 5792 true Chr04: 1364544-1370335 Glycine max
Glyma.04G017500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1364544-1365543 Glycine max
Glyma.04G017500 2.0kb upstream 2.0kb upstream 6792 true Chr04: 1365544-1372335 Glycine max
Glyma.04G017500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1370336-1372335 Glycine max
Glyma.04G017500 2.0kb downstream 2.0kb downstream 6792 true Chr04: 1363544-1370335 Glycine max
Glyma.04G017500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1363544-1365543 Glycine max
Glyma.04G017500 5.0kb upstream 5.0kb upstream 9792 true Chr04: 1365544-1375335 Glycine max
Glyma.04G017500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1370336-1375335 Glycine max
Glyma.04G017500 5.0kb downstream 5.0kb downstream 9792 true Chr04: 1360544-1370335 Glycine max
Glyma.04G017500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1360544-1365543 Glycine max
Glyma.04G017500 10.0kb upstream 10.0kb upstream 14792 true Chr04: 1365544-1380335 Glycine max
Glyma.04G017500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1370336-1380335 Glycine max
Glyma.04G017500 10.0kb downstream 10.0kb downstream 14792 true Chr04: 1355544-1370335 Glycine max
Glyma.04G017500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1355544-1365543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122309961 5265 Fabidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 364.928 0.0 3996.73 High High
cufflinks 59.1695 0.0 258.865 High  
cufflinks 103.214 0.0 486.695 High  
cufflinks 79.8671 0.0 334.934 High  
cufflinks 49.417 0.0 203.472 High  
cufflinks 83.5287 0.0 355.663 High  
cufflinks 18.6253 0.0 65.4681   Low
cufflinks 38.1885 0.0 148.639 High  
cufflinks 104.055 0.0 489.359 High  
cufflinks 7.718     High  
cufflinks 18.703     High  
cufflinks 25.772     High  
cufflinks 3.573       Low
cufflinks 3.147       Low
cufflinks 21.34     High  
cufflinks 22.895     High  
cufflinks 2.275       Low
cufflinks 11.184     High  
cufflinks 11.113     High  
cufflinks 27.492     High High
cufflinks 9.251     High  
cufflinks 23.028     High  
cufflinks 17.819     High  
cufflinks 11.307     High  
cufflinks 28.887     High High
cufflinks 7.767     High  

0 Strain