Gene : Glyma.04G027000 G. max Wm82.a2.v1
Defline:  (1 of 44) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  270
Name:  ? Glyma.04G027000 Secondary Identifier:  ? PAC:30487862
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G027000 0.5kb upstream 0.5kb upstream 2109 true Chr04: 2193861-2195969 Glycine max
Glyma.04G027000 0.5kb upstream 0.5kb upstream 500 false Chr04: 2195470-2195969 Glycine max
Glyma.04G027000 0.5kb downstream 0.5kb downstream 2109 true Chr04: 2193361-2195469 Glycine max
Glyma.04G027000 0.5kb downstream 0.5kb downstream 500 false Chr04: 2193361-2193860 Glycine max
Glyma.04G027000 1.0kb upstream 1.0kb upstream 2609 true Chr04: 2193861-2196469 Glycine max
Glyma.04G027000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2195470-2196469 Glycine max
Glyma.04G027000 1.0kb downstream 1.0kb downstream 2609 true Chr04: 2192861-2195469 Glycine max
Glyma.04G027000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2192861-2193860 Glycine max
Glyma.04G027000 2.0kb upstream 2.0kb upstream 3609 true Chr04: 2193861-2197469 Glycine max
Glyma.04G027000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2195470-2197469 Glycine max
Glyma.04G027000 2.0kb downstream 2.0kb downstream 3609 true Chr04: 2191861-2195469 Glycine max
Glyma.04G027000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2191861-2193860 Glycine max
Glyma.04G027000 5.0kb upstream 5.0kb upstream 6609 true Chr04: 2193861-2200469 Glycine max
Glyma.04G027000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2195470-2200469 Glycine max
Glyma.04G027000 5.0kb downstream 5.0kb downstream 6609 true Chr04: 2188861-2195469 Glycine max
Glyma.04G027000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2188861-2193860 Glycine max
Glyma.04G027000 10.0kb upstream 10.0kb upstream 11609 true Chr04: 2193861-2205469 Glycine max
Glyma.04G027000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2195470-2205469 Glycine max
Glyma.04G027000 10.0kb downstream 10.0kb downstream 11609 true Chr04: 2183861-2195469 Glycine max
Glyma.04G027000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2183861-2193860 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255246 5265 Fabidae View MSA
124065610 5270 Rosid View MSA
123744557 5271 Pentapetalae View MSA
122787512 5272 Eudicot View MSA
122049628 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.264909 0.0 1.89579   Low
cufflinks 6.12209 0.0 23.4024    
cufflinks 2.91181 0.0 14.1812    
cufflinks 10.2533 0.0 39.6323    
cufflinks 18.1554 0.0 63.0145    
cufflinks 24.7124 0.0 83.8699 High High
cufflinks 0.0532412 0.0 0.227046 Low Low
cufflinks 4.10979 0.0 17.7446    
cufflinks 7.88533 0.0 32.5386    
cufflinks 0.327        
cufflinks 0.607        
cufflinks 1.019        
cufflinks 1.305        
cufflinks 0.198        
cufflinks 0.968        
cufflinks 0.145        
cufflinks 6.466     High High
cufflinks 1.149        
cufflinks 3.255       High
cufflinks 0.027     Low Low
cufflinks 0.385        
cufflinks 0.14        
cufflinks 0.11        
cufflinks 0.219        
cufflinks 0.093     Low Low
cufflinks 0.956        

0 Strain