Gene : Glyma.04G030400 G. max Wm82.a2.v1
Defline:  (1 of 23) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  304
Name:  ? Glyma.04G030400 Secondary Identifier:  ? PAC:30491062
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G030400 0.5kb upstream 0.5kb upstream 4962 true Chr04: 2466301-2471262 Glycine max
Glyma.04G030400 0.5kb upstream 0.5kb upstream 500 false Chr04: 2470763-2471262 Glycine max
Glyma.04G030400 0.5kb downstream 0.5kb downstream 4962 true Chr04: 2465801-2470762 Glycine max
Glyma.04G030400 0.5kb downstream 0.5kb downstream 500 false Chr04: 2465801-2466300 Glycine max
Glyma.04G030400 1.0kb upstream 1.0kb upstream 5462 true Chr04: 2466301-2471762 Glycine max
Glyma.04G030400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2470763-2471762 Glycine max
Glyma.04G030400 1.0kb downstream 1.0kb downstream 5462 true Chr04: 2465301-2470762 Glycine max
Glyma.04G030400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2465301-2466300 Glycine max
Glyma.04G030400 2.0kb upstream 2.0kb upstream 6462 true Chr04: 2466301-2472762 Glycine max
Glyma.04G030400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2470763-2472762 Glycine max
Glyma.04G030400 2.0kb downstream 2.0kb downstream 6462 true Chr04: 2464301-2470762 Glycine max
Glyma.04G030400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2464301-2466300 Glycine max
Glyma.04G030400 5.0kb upstream 5.0kb upstream 9462 true Chr04: 2466301-2475762 Glycine max
Glyma.04G030400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2470763-2475762 Glycine max
Glyma.04G030400 5.0kb downstream 5.0kb downstream 9462 true Chr04: 2461301-2470762 Glycine max
Glyma.04G030400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2461301-2466300 Glycine max
Glyma.04G030400 10.0kb upstream 10.0kb upstream 14462 true Chr04: 2466301-2480762 Glycine max
Glyma.04G030400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2470763-2480762 Glycine max
Glyma.04G030400 10.0kb downstream 10.0kb downstream 14462 true Chr04: 2456301-2470762 Glycine max
Glyma.04G030400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2456301-2466300 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303296 5265 Fabidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8062 0.0 69.4399 High  
cufflinks 9.39527 0.0 30.2407    
cufflinks 5.11464 0.0 18.9456   Low
cufflinks 52.3717 0.0 175.577 High High
cufflinks 11.8218 0.0 35.484    
cufflinks 49.5167 0.0 166.583 High High
cufflinks 5.13013 0.0 28.4117   Low
cufflinks 20.5952 0.0 67.7365    
cufflinks 10.6958 0.0 32.9764    
cufflinks 23.031     High High
cufflinks 0.273       Low
cufflinks 6.132        
cufflinks 1.776        
cufflinks 2.429        
cufflinks 0.142       Low
cufflinks 3.733        
cufflinks 3.528        
cufflinks 28.778     High High
cufflinks 5.167        
cufflinks 1.564        
cufflinks 0.593        
cufflinks 4.022        
cufflinks 6.126        
cufflinks 0.217       Low
cufflinks 3.652        
cufflinks 1.194        

0 Strain