Gene : Glyma.04G028100 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  281
Name:  ? Glyma.04G028100 Secondary Identifier:  ? PAC:30488891
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G028100 0.5kb upstream 0.5kb upstream 1238 true Chr04: 2300213-2301450 Glycine max
Glyma.04G028100 0.5kb upstream 0.5kb upstream 500 false Chr04: 2300951-2301450 Glycine max
Glyma.04G028100 0.5kb downstream 0.5kb downstream 1238 true Chr04: 2299713-2300950 Glycine max
Glyma.04G028100 0.5kb downstream 0.5kb downstream 500 false Chr04: 2299713-2300212 Glycine max
Glyma.04G028100 1.0kb upstream 1.0kb upstream 1738 true Chr04: 2300213-2301950 Glycine max
Glyma.04G028100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2300951-2301950 Glycine max
Glyma.04G028100 1.0kb downstream 1.0kb downstream 1738 true Chr04: 2299213-2300950 Glycine max
Glyma.04G028100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2299213-2300212 Glycine max
Glyma.04G028100 2.0kb upstream 2.0kb upstream 2738 true Chr04: 2300213-2302950 Glycine max
Glyma.04G028100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2300951-2302950 Glycine max
Glyma.04G028100 2.0kb downstream 2.0kb downstream 2738 true Chr04: 2298213-2300950 Glycine max
Glyma.04G028100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2298213-2300212 Glycine max
Glyma.04G028100 5.0kb upstream 5.0kb upstream 5738 true Chr04: 2300213-2305950 Glycine max
Glyma.04G028100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2300951-2305950 Glycine max
Glyma.04G028100 5.0kb downstream 5.0kb downstream 5738 true Chr04: 2295213-2300950 Glycine max
Glyma.04G028100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2295213-2300212 Glycine max
Glyma.04G028100 10.0kb upstream 10.0kb upstream 10738 true Chr04: 2300213-2310950 Glycine max
Glyma.04G028100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2300951-2310950 Glycine max
Glyma.04G028100 10.0kb downstream 10.0kb downstream 10738 true Chr04: 2290213-2300950 Glycine max
Glyma.04G028100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2290213-2300212 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312723 5265 Fabidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.127371 0.0 0.52076 Low  
cufflinks 1.06593 0.0 3.98398    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.157       High
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain