Gene : Glyma.04G023800 G. max Wm82.a2.v1
Defline:  (1 of 30) PF05003 - Protein of unknown function (DUF668) (DUF668) Genomic Order:  238
Name:  ? Glyma.04G023800 Secondary Identifier:  ? PAC:30490339
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G023800 0.5kb upstream 0.5kb upstream 5680 true Chr04: 1905904-1911583 Glycine max
Glyma.04G023800 0.5kb upstream 0.5kb upstream 500 false Chr04: 1911084-1911583 Glycine max
Glyma.04G023800 0.5kb downstream 0.5kb downstream 5680 true Chr04: 1905404-1911083 Glycine max
Glyma.04G023800 0.5kb downstream 0.5kb downstream 500 false Chr04: 1905404-1905903 Glycine max
Glyma.04G023800 1.0kb upstream 1.0kb upstream 6180 true Chr04: 1905904-1912083 Glycine max
Glyma.04G023800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1911084-1912083 Glycine max
Glyma.04G023800 1.0kb downstream 1.0kb downstream 6180 true Chr04: 1904904-1911083 Glycine max
Glyma.04G023800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1904904-1905903 Glycine max
Glyma.04G023800 2.0kb upstream 2.0kb upstream 7180 true Chr04: 1905904-1913083 Glycine max
Glyma.04G023800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1911084-1913083 Glycine max
Glyma.04G023800 2.0kb downstream 2.0kb downstream 7180 true Chr04: 1903904-1911083 Glycine max
Glyma.04G023800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1903904-1905903 Glycine max
Glyma.04G023800 5.0kb upstream 5.0kb upstream 10180 true Chr04: 1905904-1916083 Glycine max
Glyma.04G023800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1911084-1916083 Glycine max
Glyma.04G023800 5.0kb downstream 5.0kb downstream 10180 true Chr04: 1900904-1911083 Glycine max
Glyma.04G023800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1900904-1905903 Glycine max
Glyma.04G023800 10.0kb upstream 10.0kb upstream 15180 true Chr04: 1905904-1921083 Glycine max
Glyma.04G023800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1911084-1921083 Glycine max
Glyma.04G023800 10.0kb downstream 10.0kb downstream 15180 true Chr04: 1895904-1911083 Glycine max
Glyma.04G023800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1895904-1905903 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026584 5273 Angiosperm View MSA
122301124 5265 Fabidae View MSA
124061496 5270 Rosid View MSA
123736694 5271 Pentapetalae View MSA
122794178 5272 Eudicot View MSA
121296402 5274 Embryophyte View MSA
123334571 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.29461 0.0 11.8762   High
cufflinks 1.20872 0.0 5.93509    
cufflinks 1.17254 0.0 8.29091    
cufflinks 1.05196 0.0 7.35448    
cufflinks 1.00778 0.0 6.44592    
cufflinks 4.96733 0.0 16.7758   High
cufflinks 1.58886 0.0 7.23188    
cufflinks 0.807496 0.0 4.37145    
cufflinks 0.911188 0.0 4.82859    
cufflinks 1.053        
cufflinks 1.07        
cufflinks 0.393        
cufflinks 0.35        
cufflinks 0.222       Low
cufflinks 0.184       Low
cufflinks 0.635        
cufflinks 1.499       High
cufflinks 0.338        
cufflinks 0.344        
cufflinks 0.404        
cufflinks 1.102        
cufflinks 0.526        
cufflinks 0.717        
cufflinks 1.186       High
cufflinks 0.513        
cufflinks 1.423       High

0 Strain