Gene : Glyma.04G043300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22846:SF2 - F-BOX-LIKE/WD REPEAT-CONTAINING PROTEIN EBI Genomic Order:  433
Name:  ? Glyma.04G043300 Secondary Identifier:  ? PAC:30489831
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G043300 0.5kb upstream 0.5kb upstream 6947 true Chr04: 3477650-3484596 Glycine max
Glyma.04G043300 0.5kb upstream 0.5kb upstream 500 false Chr04: 3477650-3478149 Glycine max
Glyma.04G043300 0.5kb downstream 0.5kb downstream 6947 true Chr04: 3478150-3485096 Glycine max
Glyma.04G043300 0.5kb downstream 0.5kb downstream 500 false Chr04: 3484597-3485096 Glycine max
Glyma.04G043300 1.0kb upstream 1.0kb upstream 7447 true Chr04: 3477150-3484596 Glycine max
Glyma.04G043300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3477150-3478149 Glycine max
Glyma.04G043300 1.0kb downstream 1.0kb downstream 7447 true Chr04: 3478150-3485596 Glycine max
Glyma.04G043300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3484597-3485596 Glycine max
Glyma.04G043300 2.0kb upstream 2.0kb upstream 8447 true Chr04: 3476150-3484596 Glycine max
Glyma.04G043300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3476150-3478149 Glycine max
Glyma.04G043300 2.0kb downstream 2.0kb downstream 8447 true Chr04: 3478150-3486596 Glycine max
Glyma.04G043300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3484597-3486596 Glycine max
Glyma.04G043300 5.0kb upstream 5.0kb upstream 11447 true Chr04: 3473150-3484596 Glycine max
Glyma.04G043300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3473150-3478149 Glycine max
Glyma.04G043300 5.0kb downstream 5.0kb downstream 11447 true Chr04: 3478150-3489596 Glycine max
Glyma.04G043300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3484597-3489596 Glycine max
Glyma.04G043300 10.0kb upstream 10.0kb upstream 16447 true Chr04: 3468150-3484596 Glycine max
Glyma.04G043300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3468150-3478149 Glycine max
Glyma.04G043300 10.0kb downstream 10.0kb downstream 16447 true Chr04: 3478150-3494596 Glycine max
Glyma.04G043300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3484597-3494596 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300683 5265 Fabidae View MSA
124036659 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.426 0.0 6.98089    
cufflinks 2.90148 0.0 13.3502    
cufflinks 0.88389 0.0 6.64971   Low
cufflinks 2.79611 0.0 14.8982    
cufflinks 2.29071 0.0 12.1408    
cufflinks 1.61466 0.0 7.81284    
cufflinks 3.27203 0.0 14.7562   High
cufflinks 2.64757 0.0 10.5978    
cufflinks 2.70515 0.0 14.6887    
cufflinks 0.098     Low  
cufflinks 0.034     Low Low
cufflinks 0.12        
cufflinks 0.157       High
cufflinks 0.234       High
cufflinks 0.074        
cufflinks 0.073     Low  
cufflinks 0.049     Low  
cufflinks 0.166       High
cufflinks 0.188       High
cufflinks 0.05     Low  
cufflinks 0.05     Low  
cufflinks 0.067     Low  
cufflinks 0.098     Low  
cufflinks 0.034     Low Low
cufflinks 0.069     Low  
cufflinks 0.063     Low  

0 Strain