Gene : Glyma.19G128900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12565:SF158 - TRANSCRIPTION FACTOR BHLH106-RELATED Genomic Order:  1289
Name:  ? Glyma.19G128900 Secondary Identifier:  ? PAC:30512365
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G128900 0.5kb upstream 0.5kb upstream 2834 true Chr19: 38818673-38821506 Glycine max
Glyma.19G128900 0.5kb upstream 0.5kb upstream 500 false Chr19: 38818673-38819172 Glycine max
Glyma.19G128900 0.5kb downstream 0.5kb downstream 2834 true Chr19: 38819173-38822006 Glycine max
Glyma.19G128900 0.5kb downstream 0.5kb downstream 500 false Chr19: 38821507-38822006 Glycine max
Glyma.19G128900 1.0kb upstream 1.0kb upstream 3334 true Chr19: 38818173-38821506 Glycine max
Glyma.19G128900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38818173-38819172 Glycine max
Glyma.19G128900 1.0kb downstream 1.0kb downstream 3334 true Chr19: 38819173-38822506 Glycine max
Glyma.19G128900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38821507-38822506 Glycine max
Glyma.19G128900 2.0kb upstream 2.0kb upstream 4334 true Chr19: 38817173-38821506 Glycine max
Glyma.19G128900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38817173-38819172 Glycine max
Glyma.19G128900 2.0kb downstream 2.0kb downstream 4334 true Chr19: 38819173-38823506 Glycine max
Glyma.19G128900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38821507-38823506 Glycine max
Glyma.19G128900 5.0kb upstream 5.0kb upstream 7334 true Chr19: 38814173-38821506 Glycine max
Glyma.19G128900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38814173-38819172 Glycine max
Glyma.19G128900 5.0kb downstream 5.0kb downstream 7334 true Chr19: 38819173-38826506 Glycine max
Glyma.19G128900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38821507-38826506 Glycine max
Glyma.19G128900 10.0kb upstream 10.0kb upstream 12334 true Chr19: 38809173-38821506 Glycine max
Glyma.19G128900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38809173-38819172 Glycine max
Glyma.19G128900 10.0kb downstream 10.0kb downstream 12334 true Chr19: 38819173-38831506 Glycine max
Glyma.19G128900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38821507-38831506 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308333 5265 Fabidae View MSA
124070702 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.695544 0.0 2.55054    
cufflinks 6.82823 0.0 19.4815   High
cufflinks 0.663669 0.0 2.44148    
cufflinks 0.898552 0.0 3.24372    
cufflinks 3.72459 0.0 11.474    
cufflinks 0.463554 0.0 1.7344   Low
cufflinks 1.48479 0.0 5.15424    
cufflinks 8.56856 0.0 23.8202   High
cufflinks 1.97811 0.0 6.65026    
cufflinks 0.927        
cufflinks 0.158       Low
cufflinks 0.691        
cufflinks 1.326        
cufflinks 1.399        
cufflinks 0.024     Low Low
cufflinks 1.086        
cufflinks 0.624        
cufflinks 0.538        
cufflinks 3.886       High
cufflinks 0.86        
cufflinks 0.326        
cufflinks 1.1        
cufflinks 1.996       High
cufflinks 0.381        
cufflinks 0.899        
cufflinks 0.242        

0 Strain