Gene : Glyma.04G059500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12136//PTHR12136:SF38 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  595
Name:  ? Glyma.04G059500 Secondary Identifier:  ? PAC:30487183
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G059500 0.5kb upstream 0.5kb upstream 2842 true Chr04: 4870422-4873263 Glycine max
Glyma.04G059500 0.5kb upstream 0.5kb upstream 500 false Chr04: 4870422-4870921 Glycine max
Glyma.04G059500 0.5kb downstream 0.5kb downstream 2842 true Chr04: 4870922-4873763 Glycine max
Glyma.04G059500 0.5kb downstream 0.5kb downstream 500 false Chr04: 4873264-4873763 Glycine max
Glyma.04G059500 1.0kb upstream 1.0kb upstream 3342 true Chr04: 4869922-4873263 Glycine max
Glyma.04G059500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4869922-4870921 Glycine max
Glyma.04G059500 1.0kb downstream 1.0kb downstream 3342 true Chr04: 4870922-4874263 Glycine max
Glyma.04G059500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4873264-4874263 Glycine max
Glyma.04G059500 2.0kb upstream 2.0kb upstream 4342 true Chr04: 4868922-4873263 Glycine max
Glyma.04G059500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4868922-4870921 Glycine max
Glyma.04G059500 2.0kb downstream 2.0kb downstream 4342 true Chr04: 4870922-4875263 Glycine max
Glyma.04G059500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4873264-4875263 Glycine max
Glyma.04G059500 5.0kb upstream 5.0kb upstream 7342 true Chr04: 4865922-4873263 Glycine max
Glyma.04G059500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4865922-4870921 Glycine max
Glyma.04G059500 5.0kb downstream 5.0kb downstream 7342 true Chr04: 4870922-4878263 Glycine max
Glyma.04G059500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4873264-4878263 Glycine max
Glyma.04G059500 10.0kb upstream 10.0kb upstream 12342 true Chr04: 4860922-4873263 Glycine max
Glyma.04G059500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4860922-4870921 Glycine max
Glyma.04G059500 10.0kb downstream 10.0kb downstream 12342 true Chr04: 4870922-4883263 Glycine max
Glyma.04G059500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4873264-4883263 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301077 5265 Fabidae View MSA
124064079 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9142 0.0 42.9409   High
cufflinks 4.00937 0.0 15.6628   Low
cufflinks 4.4714 0.0 17.0113   Low
cufflinks 7.29365 0.0 28.6015    
cufflinks 11.2274 0.0 35.4027    
cufflinks 10.2504 0.0 37.678    
cufflinks 9.50396 0.0 31.3959    
cufflinks 4.34412 0.0 19.3563   Low
cufflinks 9.70888 0.0 37.0856    
cufflinks 2.297        
cufflinks 2.156        
cufflinks 1.488        
cufflinks 1.77        
cufflinks 1.047       Low
cufflinks 2.472        
cufflinks 1.298        
cufflinks 7.364     High High
cufflinks 2.11        
cufflinks 0.924       Low
cufflinks 1.173        
cufflinks 3.191       High
cufflinks 1.225        
cufflinks 1.684        
cufflinks 2.145        
cufflinks 1.278        
cufflinks 2.798        

0 Strain