Gene : Glyma.19G129500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED Genomic Order:  1295
Name:  ? Glyma.19G129500 Secondary Identifier:  ? PAC:30511833
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G129500 0.5kb upstream 0.5kb upstream 18129 true Chr19: 38884116-38902244 Glycine max
Glyma.19G129500 0.5kb upstream 0.5kb upstream 500 false Chr19: 38901745-38902244 Glycine max
Glyma.19G129500 0.5kb downstream 0.5kb downstream 18129 true Chr19: 38883616-38901744 Glycine max
Glyma.19G129500 0.5kb downstream 0.5kb downstream 500 false Chr19: 38883616-38884115 Glycine max
Glyma.19G129500 1.0kb upstream 1.0kb upstream 18629 true Chr19: 38884116-38902744 Glycine max
Glyma.19G129500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38901745-38902744 Glycine max
Glyma.19G129500 1.0kb downstream 1.0kb downstream 18629 true Chr19: 38883116-38901744 Glycine max
Glyma.19G129500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38883116-38884115 Glycine max
Glyma.19G129500 2.0kb upstream 2.0kb upstream 19629 true Chr19: 38884116-38903744 Glycine max
Glyma.19G129500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38901745-38903744 Glycine max
Glyma.19G129500 2.0kb downstream 2.0kb downstream 19629 true Chr19: 38882116-38901744 Glycine max
Glyma.19G129500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38882116-38884115 Glycine max
Glyma.19G129500 5.0kb upstream 5.0kb upstream 22629 true Chr19: 38884116-38906744 Glycine max
Glyma.19G129500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38901745-38906744 Glycine max
Glyma.19G129500 5.0kb downstream 5.0kb downstream 22629 true Chr19: 38879116-38901744 Glycine max
Glyma.19G129500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38879116-38884115 Glycine max
Glyma.19G129500 10.0kb upstream 10.0kb upstream 27629 true Chr19: 38884116-38911744 Glycine max
Glyma.19G129500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38901745-38911744 Glycine max
Glyma.19G129500 10.0kb downstream 10.0kb downstream 27629 true Chr19: 38874116-38901744 Glycine max
Glyma.19G129500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38874116-38884115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247951 5265 Fabidae Singleton cluster - no MSA
124042555 5270 Rosid View MSA
123612815 5271 Pentapetalae View MSA
122647298 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9072 0.0 37.1108    
cufflinks 9.9572 0.0 29.4463   Low
cufflinks 16.5424 0.0 46.0364   High
cufflinks 12.1246 0.0 35.014    
cufflinks 14.1437 0.0 40.186    
cufflinks 17.0633 0.0 47.4761   High
cufflinks 12.1636 0.0 35.2017    
cufflinks 11.6176 0.0 33.621    
cufflinks 15.422 0.0 43.2193    
cufflinks 0.909        
cufflinks 0.855        
cufflinks 1.26       High
cufflinks 1.336       High
cufflinks 1.443       High
cufflinks 0.779       Low
cufflinks 0.97        
cufflinks 0.622       Low
cufflinks 1.279       High
cufflinks 1.059        
cufflinks 1.015        
cufflinks 0.841        
cufflinks 1.027        
cufflinks 0.963        
cufflinks 1.008        
cufflinks 0.973        
cufflinks 0.782       Low

0 Strain