Gene : Glyma.04G054100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10108:SF791 - (S)-COCLAURINE-N-METHYLTRANSFERASE-RELATED Genomic Order:  541
Name:  ? Glyma.04G054100 Secondary Identifier:  ? PAC:30490789
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G054100 0.5kb upstream 0.5kb upstream 7391 true Chr04: 4386403-4393793 Glycine max
Glyma.04G054100 0.5kb upstream 0.5kb upstream 500 false Chr04: 4393294-4393793 Glycine max
Glyma.04G054100 0.5kb downstream 0.5kb downstream 7391 true Chr04: 4385903-4393293 Glycine max
Glyma.04G054100 0.5kb downstream 0.5kb downstream 500 false Chr04: 4385903-4386402 Glycine max
Glyma.04G054100 1.0kb upstream 1.0kb upstream 7891 true Chr04: 4386403-4394293 Glycine max
Glyma.04G054100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4393294-4394293 Glycine max
Glyma.04G054100 1.0kb downstream 1.0kb downstream 7891 true Chr04: 4385403-4393293 Glycine max
Glyma.04G054100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4385403-4386402 Glycine max
Glyma.04G054100 2.0kb upstream 2.0kb upstream 8891 true Chr04: 4386403-4395293 Glycine max
Glyma.04G054100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4393294-4395293 Glycine max
Glyma.04G054100 2.0kb downstream 2.0kb downstream 8891 true Chr04: 4384403-4393293 Glycine max
Glyma.04G054100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4384403-4386402 Glycine max
Glyma.04G054100 5.0kb upstream 5.0kb upstream 11891 true Chr04: 4386403-4398293 Glycine max
Glyma.04G054100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4393294-4398293 Glycine max
Glyma.04G054100 5.0kb downstream 5.0kb downstream 11891 true Chr04: 4381403-4393293 Glycine max
Glyma.04G054100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4381403-4386402 Glycine max
Glyma.04G054100 10.0kb upstream 10.0kb upstream 16891 true Chr04: 4386403-4403293 Glycine max
Glyma.04G054100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4393294-4403293 Glycine max
Glyma.04G054100 10.0kb downstream 10.0kb downstream 16891 true Chr04: 4376403-4393293 Glycine max
Glyma.04G054100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4376403-4386402 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302427 5265 Fabidae View MSA
124064151 5270 Rosid View MSA
123753526 5271 Pentapetalae View MSA
122793663 5272 Eudicot View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.05704 0.0 21.4791    
cufflinks 39.5979 0.0 140.375 High High
cufflinks 4.37967 0.0 16.1466   Low
cufflinks 15.7091 0.0 52.919    
cufflinks 15.2209 0.0 52.9936    
cufflinks 8.69357 0.0 31.6641    
cufflinks 24.3218 0.0 82.2665 High High
cufflinks 10.3701 0.0 36.4529    
cufflinks 3.70517 0.0 11.4625   Low
cufflinks 4.266        
cufflinks 0.082       Low
cufflinks 2.293        
cufflinks 0.835        
cufflinks 1.176        
cufflinks 0.03     Low Low
cufflinks 7.136        
cufflinks 0.185        
cufflinks 4.786        
cufflinks 6.359        
cufflinks 8.692     High High
cufflinks 0.111       Low
cufflinks 7.375     High  
cufflinks 7.868     High  
cufflinks 0.05     Low Low
cufflinks 7.711     High  
cufflinks 0.143        

0 Strain