Gene : Glyma.19G129600 G. max Wm82.a2.v1
Defline:  (1 of 305) PF00646 - F-box domain (F-box) Genomic Order:  1296
Name:  ? Glyma.19G129600 Secondary Identifier:  ? PAC:30511824
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G129600 0.5kb upstream 0.5kb upstream 3479 true Chr19: 38907028-38910506 Glycine max
Glyma.19G129600 0.5kb upstream 0.5kb upstream 500 false Chr19: 38910007-38910506 Glycine max
Glyma.19G129600 0.5kb downstream 0.5kb downstream 3479 true Chr19: 38906528-38910006 Glycine max
Glyma.19G129600 0.5kb downstream 0.5kb downstream 500 false Chr19: 38906528-38907027 Glycine max
Glyma.19G129600 1.0kb upstream 1.0kb upstream 3979 true Chr19: 38907028-38911006 Glycine max
Glyma.19G129600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38910007-38911006 Glycine max
Glyma.19G129600 1.0kb downstream 1.0kb downstream 3979 true Chr19: 38906028-38910006 Glycine max
Glyma.19G129600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38906028-38907027 Glycine max
Glyma.19G129600 2.0kb upstream 2.0kb upstream 4979 true Chr19: 38907028-38912006 Glycine max
Glyma.19G129600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38910007-38912006 Glycine max
Glyma.19G129600 2.0kb downstream 2.0kb downstream 4979 true Chr19: 38905028-38910006 Glycine max
Glyma.19G129600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38905028-38907027 Glycine max
Glyma.19G129600 5.0kb upstream 5.0kb upstream 7979 true Chr19: 38907028-38915006 Glycine max
Glyma.19G129600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38910007-38915006 Glycine max
Glyma.19G129600 5.0kb downstream 5.0kb downstream 7979 true Chr19: 38902028-38910006 Glycine max
Glyma.19G129600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38902028-38907027 Glycine max
Glyma.19G129600 10.0kb upstream 10.0kb upstream 12979 true Chr19: 38907028-38920006 Glycine max
Glyma.19G129600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38910007-38920006 Glycine max
Glyma.19G129600 10.0kb downstream 10.0kb downstream 12979 true Chr19: 38897028-38910006 Glycine max
Glyma.19G129600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38897028-38907027 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309758 5265 Fabidae View MSA
124072585 5270 Rosid View MSA
123747687 5271 Pentapetalae View MSA
122796763 5272 Eudicot View MSA
122043439 5273 Angiosperm View MSA
121346744 5274 Embryophyte View MSA
123380437 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.597958 0.0 2.69638   Low
cufflinks 5.81513 0.0 22.6195    
cufflinks 14.4909 0.0 50.2   High
cufflinks 12.5632 0.0 43.2275   High
cufflinks 2.95141 0.0 9.29666    
cufflinks 1.02326 0.0 4.36033   Low
cufflinks 6.99343 0.0 26.5439    
cufflinks 5.13951 0.0 17.5427    
cufflinks 6.50628 0.0 24.4794    
cufflinks 1.498        
cufflinks 0.089       Low
cufflinks 8.933     High High
cufflinks 0.274        
cufflinks 1.073        
cufflinks 0.769        
cufflinks 1.339        
cufflinks 0.095       Low
cufflinks 4.161       High
cufflinks 1.941        
cufflinks 1.572        
cufflinks 0.235        
cufflinks 1.402        
cufflinks 0.944        
cufflinks 0.184        
cufflinks 1.066        
cufflinks 0.085       Low

0 Strain