Gene : Glyma.04G056600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10218:SF224 - GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT Genomic Order:  566
Name:  ? Glyma.04G056600 Secondary Identifier:  ? PAC:30490970
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G056600 0.5kb upstream 0.5kb upstream 6935 true Chr04: 4593407-4600341 Glycine max
Glyma.04G056600 0.5kb upstream 0.5kb upstream 500 false Chr04: 4599842-4600341 Glycine max
Glyma.04G056600 0.5kb downstream 0.5kb downstream 6935 true Chr04: 4592907-4599841 Glycine max
Glyma.04G056600 0.5kb downstream 0.5kb downstream 500 false Chr04: 4592907-4593406 Glycine max
Glyma.04G056600 1.0kb upstream 1.0kb upstream 7435 true Chr04: 4593407-4600841 Glycine max
Glyma.04G056600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4599842-4600841 Glycine max
Glyma.04G056600 1.0kb downstream 1.0kb downstream 7435 true Chr04: 4592407-4599841 Glycine max
Glyma.04G056600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4592407-4593406 Glycine max
Glyma.04G056600 2.0kb upstream 2.0kb upstream 8435 true Chr04: 4593407-4601841 Glycine max
Glyma.04G056600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4599842-4601841 Glycine max
Glyma.04G056600 2.0kb downstream 2.0kb downstream 8435 true Chr04: 4591407-4599841 Glycine max
Glyma.04G056600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4591407-4593406 Glycine max
Glyma.04G056600 5.0kb upstream 5.0kb upstream 11435 true Chr04: 4593407-4604841 Glycine max
Glyma.04G056600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4599842-4604841 Glycine max
Glyma.04G056600 5.0kb downstream 5.0kb downstream 11435 true Chr04: 4588407-4599841 Glycine max
Glyma.04G056600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4588407-4593406 Glycine max
Glyma.04G056600 10.0kb upstream 10.0kb upstream 16435 true Chr04: 4593407-4609841 Glycine max
Glyma.04G056600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4599842-4609841 Glycine max
Glyma.04G056600 10.0kb downstream 10.0kb downstream 16435 true Chr04: 4583407-4599841 Glycine max
Glyma.04G056600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4583407-4593406 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253600 5265 Fabidae View MSA
124060428 5270 Rosid View MSA
123740451 5271 Pentapetalae View MSA
122787978 5272 Eudicot View MSA
122041836 5273 Angiosperm View MSA
121344757 5274 Embryophyte View MSA
123380096 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.749679 0.0 5.10969   Low
cufflinks 4.21913 0.0 22.2368    
cufflinks 1.54275 0.0 9.05279   Low
cufflinks 2.93636 0.0 17.3636    
cufflinks 5.48395 0.0 24.0223    
cufflinks 4.02276 0.0 22.8861    
cufflinks 2.90173 0.0 16.0408    
cufflinks 4.67672 0.0 24.0132    
cufflinks 4.56203 0.0 23.2007    
cufflinks 0.252       High
cufflinks 0.066       Low
cufflinks 0.183        
cufflinks 0.243        
cufflinks 0.203        
cufflinks 0.036     Low Low
cufflinks 0.153        
cufflinks 0.123        
cufflinks 0.27       High
cufflinks 0.335       High
cufflinks 0.124        
cufflinks 0.063       Low
cufflinks 0.149        
cufflinks 0.151        
cufflinks 0.053     Low Low
cufflinks 0.148        
cufflinks 0.099        

0 Strain