Gene : Glyma.04G052700 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG2922 - Uncharacterized conserved protein Genomic Order:  527
Name:  ? Glyma.04G052700 Secondary Identifier:  ? PAC:30488697
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G052700 0.5kb upstream 0.5kb upstream 5043 true Chr04: 4270522-4275564 Glycine max
Glyma.04G052700 0.5kb upstream 0.5kb upstream 500 false Chr04: 4275065-4275564 Glycine max
Glyma.04G052700 0.5kb downstream 0.5kb downstream 5043 true Chr04: 4270022-4275064 Glycine max
Glyma.04G052700 0.5kb downstream 0.5kb downstream 500 false Chr04: 4270022-4270521 Glycine max
Glyma.04G052700 1.0kb upstream 1.0kb upstream 5543 true Chr04: 4270522-4276064 Glycine max
Glyma.04G052700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4275065-4276064 Glycine max
Glyma.04G052700 1.0kb downstream 1.0kb downstream 5543 true Chr04: 4269522-4275064 Glycine max
Glyma.04G052700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4269522-4270521 Glycine max
Glyma.04G052700 2.0kb upstream 2.0kb upstream 6543 true Chr04: 4270522-4277064 Glycine max
Glyma.04G052700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4275065-4277064 Glycine max
Glyma.04G052700 2.0kb downstream 2.0kb downstream 6543 true Chr04: 4268522-4275064 Glycine max
Glyma.04G052700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4268522-4270521 Glycine max
Glyma.04G052700 5.0kb upstream 5.0kb upstream 9543 true Chr04: 4270522-4280064 Glycine max
Glyma.04G052700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4275065-4280064 Glycine max
Glyma.04G052700 5.0kb downstream 5.0kb downstream 9543 true Chr04: 4265522-4275064 Glycine max
Glyma.04G052700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4265522-4270521 Glycine max
Glyma.04G052700 10.0kb upstream 10.0kb upstream 14543 true Chr04: 4270522-4285064 Glycine max
Glyma.04G052700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4275065-4285064 Glycine max
Glyma.04G052700 10.0kb downstream 10.0kb downstream 14543 true Chr04: 4260522-4275064 Glycine max
Glyma.04G052700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4260522-4270521 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311848 5265 Fabidae View MSA
124065419 5270 Rosid View MSA
123737318 5271 Pentapetalae View MSA
122791606 5272 Eudicot View MSA
122046404 5273 Angiosperm View MSA
121346413 5274 Embryophyte View MSA
123423946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9698 0.0 69.6785   High
cufflinks 6.65473 0.0 26.6018   Low
cufflinks 19.1128 0.0 72.4355   High
cufflinks 8.35191 0.0 35.6166    
cufflinks 9.33009 0.0 39.6324    
cufflinks 12.3279 0.0 43.0092    
cufflinks 11.3791 0.0 46.3988    
cufflinks 8.0523 0.0 34.5689    
cufflinks 10.2329 0.0 41.568    
cufflinks 0.604       Low
cufflinks 3.057       High
cufflinks 1.176        
cufflinks 0.864        
cufflinks 0.894        
cufflinks 2.902       High
cufflinks 1.22        
cufflinks 1.049        
cufflinks 1.101        
cufflinks 0.776       Low
cufflinks 1.775        
cufflinks 2.415       High
cufflinks 1.525        
cufflinks 0.88        
cufflinks 2.463       High
cufflinks 1.419        
cufflinks 1.612        

0 Strain