Gene : Glyma.19G130000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10169:SF35 - DNA GYRASE B3-RELATED Genomic Order:  1300
Name:  ? Glyma.19G130000 Secondary Identifier:  ? PAC:30514412
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G130000 0.5kb upstream 0.5kb upstream 14917 true Chr19: 38949361-38964277 Glycine max
Glyma.19G130000 0.5kb upstream 0.5kb upstream 500 false Chr19: 38963778-38964277 Glycine max
Glyma.19G130000 0.5kb downstream 0.5kb downstream 14917 true Chr19: 38948861-38963777 Glycine max
Glyma.19G130000 0.5kb downstream 0.5kb downstream 500 false Chr19: 38948861-38949360 Glycine max
Glyma.19G130000 1.0kb upstream 1.0kb upstream 15417 true Chr19: 38949361-38964777 Glycine max
Glyma.19G130000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38963778-38964777 Glycine max
Glyma.19G130000 1.0kb downstream 1.0kb downstream 15417 true Chr19: 38948361-38963777 Glycine max
Glyma.19G130000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38948361-38949360 Glycine max
Glyma.19G130000 2.0kb upstream 2.0kb upstream 16417 true Chr19: 38949361-38965777 Glycine max
Glyma.19G130000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38963778-38965777 Glycine max
Glyma.19G130000 2.0kb downstream 2.0kb downstream 16417 true Chr19: 38947361-38963777 Glycine max
Glyma.19G130000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38947361-38949360 Glycine max
Glyma.19G130000 5.0kb upstream 5.0kb upstream 19417 true Chr19: 38949361-38968777 Glycine max
Glyma.19G130000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38963778-38968777 Glycine max
Glyma.19G130000 5.0kb downstream 5.0kb downstream 19417 true Chr19: 38944361-38963777 Glycine max
Glyma.19G130000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38944361-38949360 Glycine max
Glyma.19G130000 10.0kb upstream 10.0kb upstream 24417 true Chr19: 38949361-38973777 Glycine max
Glyma.19G130000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38963778-38973777 Glycine max
Glyma.19G130000 10.0kb downstream 10.0kb downstream 24417 true Chr19: 38939361-38963777 Glycine max
Glyma.19G130000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38939361-38949360 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300478 5265 Fabidae View MSA
124066997 5270 Rosid View MSA
123739357 5271 Pentapetalae View MSA
122792623 5272 Eudicot View MSA
122042515 5273 Angiosperm View MSA
121346191 5274 Embryophyte View MSA
123426426 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.07176 0.0 19.0323   High
cufflinks 9.6406 0.0 25.734   High
cufflinks 2.95519 0.0 8.52958   Low
cufflinks 3.61849 0.0 10.218    
cufflinks 6.62566 0.0 17.8909    
cufflinks 3.36205 0.0 9.59226    
cufflinks 3.97224 0.0 11.143    
cufflinks 4.42359 0.0 12.2743    
cufflinks 4.25973 0.0 11.8621    
cufflinks 1.009        
cufflinks 0.09       Low
cufflinks 1.038        
cufflinks 1.3        
cufflinks 1.632        
cufflinks 0.322        
cufflinks 2.88       High
cufflinks 0.24       Low
cufflinks 1.461        
cufflinks 2.517        
cufflinks 2.003        
cufflinks 0.209       Low
cufflinks 2.35        
cufflinks 3.302       High
cufflinks 0.16       Low
cufflinks 2.672        
cufflinks 0.344        

0 Strain