Gene : Glyma.04G053300 G. max Wm82.a2.v1
Defline:  (1 of 8) 3.4.11.2 - Membrane alanyl aminopeptidase / Peptidase E Genomic Order:  533
Name:  ? Glyma.04G053300 Secondary Identifier:  ? PAC:30489221
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6842 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G053300 0.5kb upstream 0.5kb upstream 7093 true Chr04: 4339108-4346200 Glycine max
Glyma.04G053300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4339108-4339607 Glycine max
Glyma.04G053300 0.5kb downstream 0.5kb downstream 7093 true Chr04: 4339608-4346700 Glycine max
Glyma.04G053300 0.5kb downstream 0.5kb downstream 500 false Chr04: 4346201-4346700 Glycine max
Glyma.04G053300 1.0kb upstream 1.0kb upstream 7593 true Chr04: 4338608-4346200 Glycine max
Glyma.04G053300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4338608-4339607 Glycine max
Glyma.04G053300 1.0kb downstream 1.0kb downstream 7593 true Chr04: 4339608-4347200 Glycine max
Glyma.04G053300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4346201-4347200 Glycine max
Glyma.04G053300 2.0kb upstream 2.0kb upstream 8593 true Chr04: 4337608-4346200 Glycine max
Glyma.04G053300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4337608-4339607 Glycine max
Glyma.04G053300 2.0kb downstream 2.0kb downstream 8593 true Chr04: 4339608-4348200 Glycine max
Glyma.04G053300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4346201-4348200 Glycine max
Glyma.04G053300 5.0kb upstream 5.0kb upstream 11593 true Chr04: 4334608-4346200 Glycine max
Glyma.04G053300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4334608-4339607 Glycine max
Glyma.04G053300 5.0kb downstream 5.0kb downstream 11593 true Chr04: 4339608-4351200 Glycine max
Glyma.04G053300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4346201-4351200 Glycine max
Glyma.04G053300 10.0kb upstream 10.0kb upstream 16593 true Chr04: 4329608-4346200 Glycine max
Glyma.04G053300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4329608-4339607 Glycine max
Glyma.04G053300 10.0kb downstream 10.0kb downstream 16593 true Chr04: 4339608-4356200 Glycine max
Glyma.04G053300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4346201-4356200 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307683 5265 Fabidae View MSA
124064231 5270 Rosid View MSA
123745445 5271 Pentapetalae View MSA
122791441 5272 Eudicot View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0337 0.0 68.3284    
cufflinks 20.2213 0.0 81.5359 High  
cufflinks 63.1621 0.0 368.353 High High
cufflinks 27.653 0.0 119.382 High  
cufflinks 31.0896 0.0 140.131 High  
cufflinks 42.1596 0.0 184.942 High  
cufflinks 30.2052 0.0 150.047 High  
cufflinks 15.6423 0.0 54.6502   Low
cufflinks 22.9848 0.0 96.0831 High  
cufflinks 1.816        
cufflinks 1.766        
cufflinks 4.011       High
cufflinks 3.749       High
cufflinks 3.727       High
cufflinks 0.96       Low
cufflinks 1.615        
cufflinks 1.993        
cufflinks 2.255        
cufflinks 2.321        
cufflinks 1.425        
cufflinks 2.641        
cufflinks 1.588        
cufflinks 1.322       Low
cufflinks 2.51        
cufflinks 1.384        
cufflinks 2.338        

0 Strain