Gene : Glyma.04G062800 G. max Wm82.a2.v1
Defline:  (1 of 31) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  628
Name:  ? Glyma.04G062800 Secondary Identifier:  ? PAC:30489993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G062800 0.5kb upstream 0.5kb upstream 1518 true Chr04: 5197546-5199063 Glycine max
Glyma.04G062800 0.5kb upstream 0.5kb upstream 500 false Chr04: 5198564-5199063 Glycine max
Glyma.04G062800 0.5kb downstream 0.5kb downstream 1518 true Chr04: 5197046-5198563 Glycine max
Glyma.04G062800 0.5kb downstream 0.5kb downstream 500 false Chr04: 5197046-5197545 Glycine max
Glyma.04G062800 1.0kb upstream 1.0kb upstream 2018 true Chr04: 5197546-5199563 Glycine max
Glyma.04G062800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5198564-5199563 Glycine max
Glyma.04G062800 1.0kb downstream 1.0kb downstream 2018 true Chr04: 5196546-5198563 Glycine max
Glyma.04G062800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5196546-5197545 Glycine max
Glyma.04G062800 2.0kb upstream 2.0kb upstream 3018 true Chr04: 5197546-5200563 Glycine max
Glyma.04G062800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5198564-5200563 Glycine max
Glyma.04G062800 2.0kb downstream 2.0kb downstream 3018 true Chr04: 5195546-5198563 Glycine max
Glyma.04G062800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5195546-5197545 Glycine max
Glyma.04G062800 5.0kb upstream 5.0kb upstream 6018 true Chr04: 5197546-5203563 Glycine max
Glyma.04G062800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5198564-5203563 Glycine max
Glyma.04G062800 5.0kb downstream 5.0kb downstream 6018 true Chr04: 5192546-5198563 Glycine max
Glyma.04G062800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5192546-5197545 Glycine max
Glyma.04G062800 10.0kb upstream 10.0kb upstream 11018 true Chr04: 5197546-5208563 Glycine max
Glyma.04G062800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5198564-5208563 Glycine max
Glyma.04G062800 10.0kb downstream 10.0kb downstream 11018 true Chr04: 5187546-5198563 Glycine max
Glyma.04G062800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5187546-5197545 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
122248820 5265 Fabidae Singleton cluster - no MSA
123992344 5270 Rosid Singleton cluster - no MSA
123567219 5271 Pentapetalae Singleton cluster - no MSA
122601971 5272 Eudicot Singleton cluster - no MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.03416 0.0 16.1825    
cufflinks 2.1318 0.0 7.57275    
cufflinks 8.83033 0.0 26.7629   High
cufflinks 1.43285 0.0 5.2159   Low
cufflinks 2.48296 0.0 8.61075    
cufflinks 4.66459 0.0 15.1658    
cufflinks 0.951508 0.0 3.52634   Low
cufflinks 3.35756 0.0 11.4091    
cufflinks 3.30515 0.0 11.2322    
cufflinks 4.477        
cufflinks 9.634     High  
cufflinks 7.777     High  
cufflinks 2.797        
cufflinks 1.598       Low
cufflinks 8.062     High  
cufflinks 3.323        
cufflinks 31.238     High High
cufflinks 2.975        
cufflinks 2.788        
cufflinks 2.49        
cufflinks 11.434     High  
cufflinks 3.801        
cufflinks 4.469        
cufflinks 10.797     High  
cufflinks 2.272       Low
cufflinks 17.668     High High

0 Strain