Gene : Glyma.04G079900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11649//PTHR11649:SF49 - MSS1/TRME-RELATED GTP-BINDING PROTEIN Genomic Order:  799
Name:  ? Glyma.04G079900 Secondary Identifier:  ? PAC:30491187
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G079900 0.5kb upstream 0.5kb upstream 6134 true Chr04: 6716583-6722716 Glycine max
Glyma.04G079900 0.5kb upstream 0.5kb upstream 500 false Chr04: 6722217-6722716 Glycine max
Glyma.04G079900 0.5kb downstream 0.5kb downstream 6134 true Chr04: 6716083-6722216 Glycine max
Glyma.04G079900 0.5kb downstream 0.5kb downstream 500 false Chr04: 6716083-6716582 Glycine max
Glyma.04G079900 1.0kb upstream 1.0kb upstream 6634 true Chr04: 6716583-6723216 Glycine max
Glyma.04G079900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6722217-6723216 Glycine max
Glyma.04G079900 1.0kb downstream 1.0kb downstream 6634 true Chr04: 6715583-6722216 Glycine max
Glyma.04G079900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6715583-6716582 Glycine max
Glyma.04G079900 2.0kb upstream 2.0kb upstream 7634 true Chr04: 6716583-6724216 Glycine max
Glyma.04G079900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6722217-6724216 Glycine max
Glyma.04G079900 2.0kb downstream 2.0kb downstream 7634 true Chr04: 6714583-6722216 Glycine max
Glyma.04G079900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6714583-6716582 Glycine max
Glyma.04G079900 5.0kb upstream 5.0kb upstream 10634 true Chr04: 6716583-6727216 Glycine max
Glyma.04G079900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6722217-6727216 Glycine max
Glyma.04G079900 5.0kb downstream 5.0kb downstream 10634 true Chr04: 6711583-6722216 Glycine max
Glyma.04G079900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6711583-6716582 Glycine max
Glyma.04G079900 10.0kb upstream 10.0kb upstream 15634 true Chr04: 6716583-6732216 Glycine max
Glyma.04G079900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6722217-6732216 Glycine max
Glyma.04G079900 10.0kb downstream 10.0kb downstream 15634 true Chr04: 6706583-6722216 Glycine max
Glyma.04G079900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6706583-6716582 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302742 5265 Fabidae View MSA
124074184 5270 Rosid View MSA
123739065 5271 Pentapetalae View MSA
122788793 5272 Eudicot View MSA
122045956 5273 Angiosperm View MSA
121345764 5274 Embryophyte View MSA
123427955 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.79252 0.0 34.5153   High
cufflinks 5.18237 0.0 35.387    
cufflinks 4.90184 0.0 36.7497    
cufflinks 3.94579 0.0 32.4921    
cufflinks 3.70613 0.0 29.5054    
cufflinks 3.9947 0.0 20.7412    
cufflinks 4.07055 0.0 25.9733    
cufflinks 5.14168 0.0 37.4277    
cufflinks 3.2523 0.0 20.8731   Low
cufflinks 0.58        
cufflinks 0.227       Low
cufflinks 0.519        
cufflinks 0.334        
cufflinks 0.263       Low
cufflinks 0.304        
cufflinks 0.537        
cufflinks 0.882       High
cufflinks 0.44        
cufflinks 0.697       High
cufflinks 0.45        
cufflinks 0.199       Low
cufflinks 0.468        
cufflinks 0.731       High
cufflinks 0.277        
cufflinks 0.506        
cufflinks 0.258       Low

0 Strain