Gene : Glyma.03G242100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10857:SF26 - PROTEIN BONZAI 3 Genomic Order:  2421
Name:  ? Glyma.03G242100 Secondary Identifier:  ? PAC:30515681
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G242100 0.5kb upstream 0.5kb upstream 8207 true Chr03: 44008358-44016564 Glycine max
Glyma.03G242100 0.5kb upstream 0.5kb upstream 500 false Chr03: 44016065-44016564 Glycine max
Glyma.03G242100 0.5kb downstream 0.5kb downstream 8207 true Chr03: 44007858-44016064 Glycine max
Glyma.03G242100 0.5kb downstream 0.5kb downstream 500 false Chr03: 44007858-44008357 Glycine max
Glyma.03G242100 1.0kb upstream 1.0kb upstream 8707 true Chr03: 44008358-44017064 Glycine max
Glyma.03G242100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44016065-44017064 Glycine max
Glyma.03G242100 1.0kb downstream 1.0kb downstream 8707 true Chr03: 44007358-44016064 Glycine max
Glyma.03G242100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44007358-44008357 Glycine max
Glyma.03G242100 2.0kb upstream 2.0kb upstream 9707 true Chr03: 44008358-44018064 Glycine max
Glyma.03G242100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44016065-44018064 Glycine max
Glyma.03G242100 2.0kb downstream 2.0kb downstream 9707 true Chr03: 44006358-44016064 Glycine max
Glyma.03G242100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44006358-44008357 Glycine max
Glyma.03G242100 5.0kb upstream 5.0kb upstream 12707 true Chr03: 44008358-44021064 Glycine max
Glyma.03G242100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44016065-44021064 Glycine max
Glyma.03G242100 5.0kb downstream 5.0kb downstream 12707 true Chr03: 44003358-44016064 Glycine max
Glyma.03G242100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44003358-44008357 Glycine max
Glyma.03G242100 10.0kb upstream 10.0kb upstream 17707 true Chr03: 44008358-44026064 Glycine max
Glyma.03G242100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44016065-44026064 Glycine max
Glyma.03G242100 10.0kb downstream 10.0kb downstream 17707 true Chr03: 43998358-44016064 Glycine max
Glyma.03G242100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43998358-44008357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306328 5265 Fabidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.470241 0.0 1.7203    
cufflinks 0.975978 0.0 3.38371    
cufflinks 1.08976 0.0 3.72299    
cufflinks 0.174073 0.0 0.667029 Low Low
cufflinks 0.360878 0.0 1.33955    
cufflinks 4.68091 0.0 13.2648   High
cufflinks 0.152975 0.0 0.590381 Low Low
cufflinks 0.721603 0.0 2.56418    
cufflinks 0.625229 0.0 2.24524    
cufflinks 0.317        
cufflinks 0.98       High
cufflinks 0.21       Low
cufflinks 0.764       High
cufflinks 0.167       Low
cufflinks 0.259        
cufflinks 0.354        
cufflinks 0.317        
cufflinks 0.322        
cufflinks 0.356        
cufflinks 0.318        
cufflinks 0.309        
cufflinks 0.389        
cufflinks 0.405        
cufflinks 1.002       High
cufflinks 0.251        
cufflinks 1.605       High

0 Strain