Gene : Glyma.19G121600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22778//PTHR22778:SF22 - OVARIAN CANCER GENE-2 PROTEIN-RELATED Genomic Order:  1216
Name:  ? Glyma.19G121600 Secondary Identifier:  ? PAC:30513496
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3841 Glycine max pathologic  
Gmax PWY-6612 Glycine max pathologic  
Gmax PWY-6614 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G121600 0.5kb upstream 0.5kb upstream 2567 true Chr19: 37987724-37990290 Glycine max
Glyma.19G121600 0.5kb upstream 0.5kb upstream 500 false Chr19: 37989791-37990290 Glycine max
Glyma.19G121600 0.5kb downstream 0.5kb downstream 2567 true Chr19: 37987224-37989790 Glycine max
Glyma.19G121600 0.5kb downstream 0.5kb downstream 500 false Chr19: 37987224-37987723 Glycine max
Glyma.19G121600 1.0kb upstream 1.0kb upstream 3067 true Chr19: 37987724-37990790 Glycine max
Glyma.19G121600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37989791-37990790 Glycine max
Glyma.19G121600 1.0kb downstream 1.0kb downstream 3067 true Chr19: 37986724-37989790 Glycine max
Glyma.19G121600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37986724-37987723 Glycine max
Glyma.19G121600 2.0kb upstream 2.0kb upstream 4067 true Chr19: 37987724-37991790 Glycine max
Glyma.19G121600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37989791-37991790 Glycine max
Glyma.19G121600 2.0kb downstream 2.0kb downstream 4067 true Chr19: 37985724-37989790 Glycine max
Glyma.19G121600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37985724-37987723 Glycine max
Glyma.19G121600 5.0kb upstream 5.0kb upstream 7067 true Chr19: 37987724-37994790 Glycine max
Glyma.19G121600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37989791-37994790 Glycine max
Glyma.19G121600 5.0kb downstream 5.0kb downstream 7067 true Chr19: 37982724-37989790 Glycine max
Glyma.19G121600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37982724-37987723 Glycine max
Glyma.19G121600 10.0kb upstream 10.0kb upstream 12067 true Chr19: 37987724-37999790 Glycine max
Glyma.19G121600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37989791-37999790 Glycine max
Glyma.19G121600 10.0kb downstream 10.0kb downstream 12067 true Chr19: 37977724-37989790 Glycine max
Glyma.19G121600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37977724-37987723 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309691 5265 Fabidae View MSA
124070831 5270 Rosid View MSA
123747932 5271 Pentapetalae View MSA
122794678 5272 Eudicot View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.5345 0.0 91.0038 High  
cufflinks 29.4284 0.0 93.5376 High  
cufflinks 5.51482 0.0 23.7555   Low
cufflinks 28.5424 0.0 96.5473 High  
cufflinks 49.7165 0.0 150.884 High  
cufflinks 116.019 0.0 369.887 High High
cufflinks 66.5495 0.0 208.297 High  
cufflinks 9.37752 0.0 37.6335   Low
cufflinks 57.7419 0.0 180.463 High  
cufflinks 14.043     High  
cufflinks 13.471     High  
cufflinks 7.251     High Low
cufflinks 58.82     High High
cufflinks 46.444     High High
cufflinks 13.117     High  
cufflinks 7.178     High Low
cufflinks 32.493     High  
cufflinks 14.579     High  
cufflinks 29.598     High  
cufflinks 4.684       Low
cufflinks 17.017     High  
cufflinks 9.469     High  
cufflinks 13.266     High  
cufflinks 26.439     High  
cufflinks 4.689       Low
cufflinks 31.557     High  

0 Strain