Gene : Glyma.03G247200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33162:SF1 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC Genomic Order:  2472
Name:  ? Glyma.03G247200 Secondary Identifier:  ? PAC:30519032
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G247200 0.5kb upstream 0.5kb upstream 1555 true Chr03: 44399613-44401167 Glycine max
Glyma.03G247200 0.5kb upstream 0.5kb upstream 500 false Chr03: 44399613-44400112 Glycine max
Glyma.03G247200 0.5kb downstream 0.5kb downstream 1555 true Chr03: 44400113-44401667 Glycine max
Glyma.03G247200 0.5kb downstream 0.5kb downstream 500 false Chr03: 44401168-44401667 Glycine max
Glyma.03G247200 1.0kb upstream 1.0kb upstream 2055 true Chr03: 44399113-44401167 Glycine max
Glyma.03G247200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44399113-44400112 Glycine max
Glyma.03G247200 1.0kb downstream 1.0kb downstream 2055 true Chr03: 44400113-44402167 Glycine max
Glyma.03G247200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44401168-44402167 Glycine max
Glyma.03G247200 2.0kb upstream 2.0kb upstream 3055 true Chr03: 44398113-44401167 Glycine max
Glyma.03G247200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44398113-44400112 Glycine max
Glyma.03G247200 2.0kb downstream 2.0kb downstream 3055 true Chr03: 44400113-44403167 Glycine max
Glyma.03G247200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44401168-44403167 Glycine max
Glyma.03G247200 5.0kb upstream 5.0kb upstream 6055 true Chr03: 44395113-44401167 Glycine max
Glyma.03G247200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44395113-44400112 Glycine max
Glyma.03G247200 5.0kb downstream 5.0kb downstream 6055 true Chr03: 44400113-44406167 Glycine max
Glyma.03G247200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44401168-44406167 Glycine max
Glyma.03G247200 10.0kb upstream 10.0kb upstream 11055 true Chr03: 44390113-44401167 Glycine max
Glyma.03G247200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44390113-44400112 Glycine max
Glyma.03G247200 10.0kb downstream 10.0kb downstream 11055 true Chr03: 44400113-44411167 Glycine max
Glyma.03G247200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44401168-44411167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311310 5265 Fabidae View MSA
124067421 5270 Rosid View MSA
123742518 5271 Pentapetalae View MSA
122797436 5272 Eudicot View MSA
122042839 5273 Angiosperm View MSA
123429010 5275 Viridiplantae View MSA
121350142 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.256 0.0 129.125 High High
cufflinks 23.7612 0.0 76.3453 High High
cufflinks 18.5592 0.0 58.4579    
cufflinks 9.04392 0.0 34.8931    
cufflinks 6.71914 0.0 28.3759    
cufflinks 8.44714 0.0 32.8924    
cufflinks 10.1928 0.0 40.0294    
cufflinks 7.54839 0.0 31.4697    
cufflinks 6.6433 0.0 28.5364    
cufflinks 10.512     High  
cufflinks 17.893     High  
cufflinks 11.891     High  
cufflinks 1.838       Low
cufflinks 2.516       Low
cufflinks 14.696     High  
cufflinks 21.136     High  
cufflinks 13.096     High  
cufflinks 8.298     High  
cufflinks 17.028     High  
cufflinks 25.265     High  
cufflinks 20.09     High  
cufflinks 25.341     High  
cufflinks 32.589     High High
cufflinks 24.569     High  
cufflinks 22.934     High  
cufflinks 20.292     High  

0 Strain