Gene : Glyma.19G121800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34267:SF1 - AT0ZI1 PROTEIN Genomic Order:  1218
Name:  ? Glyma.19G121800 Secondary Identifier:  ? PAC:30512606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G121800 0.5kb upstream 0.5kb upstream 3355 true Chr19: 38009480-38012834 Glycine max
Glyma.19G121800 0.5kb upstream 0.5kb upstream 500 false Chr19: 38009480-38009979 Glycine max
Glyma.19G121800 0.5kb downstream 0.5kb downstream 3355 true Chr19: 38009980-38013334 Glycine max
Glyma.19G121800 0.5kb downstream 0.5kb downstream 500 false Chr19: 38012835-38013334 Glycine max
Glyma.19G121800 1.0kb upstream 1.0kb upstream 3855 true Chr19: 38008980-38012834 Glycine max
Glyma.19G121800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38008980-38009979 Glycine max
Glyma.19G121800 1.0kb downstream 1.0kb downstream 3855 true Chr19: 38009980-38013834 Glycine max
Glyma.19G121800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38012835-38013834 Glycine max
Glyma.19G121800 2.0kb upstream 2.0kb upstream 4855 true Chr19: 38007980-38012834 Glycine max
Glyma.19G121800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38007980-38009979 Glycine max
Glyma.19G121800 2.0kb downstream 2.0kb downstream 4855 true Chr19: 38009980-38014834 Glycine max
Glyma.19G121800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38012835-38014834 Glycine max
Glyma.19G121800 5.0kb upstream 5.0kb upstream 7855 true Chr19: 38004980-38012834 Glycine max
Glyma.19G121800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38004980-38009979 Glycine max
Glyma.19G121800 5.0kb downstream 5.0kb downstream 7855 true Chr19: 38009980-38017834 Glycine max
Glyma.19G121800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38012835-38017834 Glycine max
Glyma.19G121800 10.0kb upstream 10.0kb upstream 12855 true Chr19: 37999980-38012834 Glycine max
Glyma.19G121800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37999980-38009979 Glycine max
Glyma.19G121800 10.0kb downstream 10.0kb downstream 12855 true Chr19: 38009980-38022834 Glycine max
Glyma.19G121800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38012835-38022834 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314331 5265 Fabidae View MSA
124073566 5270 Rosid View MSA
123737481 5271 Pentapetalae View MSA
122795040 5272 Eudicot View MSA
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.4708 0.0 112.077 High Low
cufflinks 49.6449 0.0 133.077 High  
cufflinks 53.804 0.0 143.963 High  
cufflinks 44.1732 0.0 118.932 High Low
cufflinks 73.2906 0.0 195.613 High  
cufflinks 75.9445 0.0 202.741 High  
cufflinks 72.6501 0.0 193.836 High  
cufflinks 64.8785 0.0 173.104 High  
cufflinks 75.0985 0.0 200.519 High  
cufflinks 10.775     High High
cufflinks 7.188     High  
cufflinks 7.649     High  
cufflinks 12.263     High High
cufflinks 12.285     High High
cufflinks 7.193     High  
cufflinks 5.933        
cufflinks 7.01     High  
cufflinks 9.838     High  
cufflinks 7.08        
cufflinks 5.616       Low
cufflinks 7.113     High  
cufflinks 5.8       Low
cufflinks 5.97        
cufflinks 8.127     High  
cufflinks 5.203       Low
cufflinks 8.76     High  

0 Strain