Gene : Glyma.03G244700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11599:SF5 - PROTEASOME SUBUNIT BETA TYPE-4 Genomic Order:  2447
Name:  ? Glyma.03G244700 Secondary Identifier:  ? PAC:30516594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G244700 0.5kb upstream 0.5kb upstream 3417 true Chr03: 44216878-44220294 Glycine max
Glyma.03G244700 0.5kb upstream 0.5kb upstream 500 false Chr03: 44219795-44220294 Glycine max
Glyma.03G244700 0.5kb downstream 0.5kb downstream 3417 true Chr03: 44216378-44219794 Glycine max
Glyma.03G244700 0.5kb downstream 0.5kb downstream 500 false Chr03: 44216378-44216877 Glycine max
Glyma.03G244700 1.0kb upstream 1.0kb upstream 3917 true Chr03: 44216878-44220794 Glycine max
Glyma.03G244700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44219795-44220794 Glycine max
Glyma.03G244700 1.0kb downstream 1.0kb downstream 3917 true Chr03: 44215878-44219794 Glycine max
Glyma.03G244700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44215878-44216877 Glycine max
Glyma.03G244700 2.0kb upstream 2.0kb upstream 4917 true Chr03: 44216878-44221794 Glycine max
Glyma.03G244700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44219795-44221794 Glycine max
Glyma.03G244700 2.0kb downstream 2.0kb downstream 4917 true Chr03: 44214878-44219794 Glycine max
Glyma.03G244700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44214878-44216877 Glycine max
Glyma.03G244700 5.0kb upstream 5.0kb upstream 7917 true Chr03: 44216878-44224794 Glycine max
Glyma.03G244700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44219795-44224794 Glycine max
Glyma.03G244700 5.0kb downstream 5.0kb downstream 7917 true Chr03: 44211878-44219794 Glycine max
Glyma.03G244700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44211878-44216877 Glycine max
Glyma.03G244700 10.0kb upstream 10.0kb upstream 12917 true Chr03: 44216878-44229794 Glycine max
Glyma.03G244700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44219795-44229794 Glycine max
Glyma.03G244700 10.0kb downstream 10.0kb downstream 12917 true Chr03: 44206878-44219794 Glycine max
Glyma.03G244700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44206878-44216877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245512 5265 Fabidae Singleton cluster - no MSA
123989628 5270 Rosid Singleton cluster - no MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.7692 0.0 134.174 High Low
cufflinks 72.6095 0.0 200.824 High  
cufflinks 58.597 0.0 159.495 High  
cufflinks 50.5311 0.0 136.37 High Low
cufflinks 101.539 0.0 291.551 High High
cufflinks 122.442 0.0 360.915 High High
cufflinks 72.7207 0.0 200.941 High  
cufflinks 85.0533 0.0 238.913 High  
cufflinks 81.2891 0.0 227.26 High  
cufflinks 27.514     High  
cufflinks 19.626     High  
cufflinks 20.099     High  
cufflinks 48.155     High High
cufflinks 62.388     High High
cufflinks 13.054     High Low
cufflinks 20.774     High  
cufflinks 16.663     High  
cufflinks 22.415     High  
cufflinks 25.015     High  
cufflinks 18.13     High  
cufflinks 22.111     High  
cufflinks 19.226     High  
cufflinks 20.904     High  
cufflinks 21.413     High  
cufflinks 19.506     High  
cufflinks 24.246     High  

0 Strain