Gene : Glyma.03G247400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31734:SF28 - AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  2474
Name:  ? Glyma.03G247400 Secondary Identifier:  ? PAC:30518414
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G247400 0.5kb upstream 0.5kb upstream 3116 true Chr03: 44423006-44426121 Glycine max
Glyma.03G247400 0.5kb upstream 0.5kb upstream 500 false Chr03: 44423006-44423505 Glycine max
Glyma.03G247400 0.5kb downstream 0.5kb downstream 3116 true Chr03: 44423506-44426621 Glycine max
Glyma.03G247400 0.5kb downstream 0.5kb downstream 500 false Chr03: 44426122-44426621 Glycine max
Glyma.03G247400 1.0kb upstream 1.0kb upstream 3616 true Chr03: 44422506-44426121 Glycine max
Glyma.03G247400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44422506-44423505 Glycine max
Glyma.03G247400 1.0kb downstream 1.0kb downstream 3616 true Chr03: 44423506-44427121 Glycine max
Glyma.03G247400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44426122-44427121 Glycine max
Glyma.03G247400 2.0kb upstream 2.0kb upstream 4616 true Chr03: 44421506-44426121 Glycine max
Glyma.03G247400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44421506-44423505 Glycine max
Glyma.03G247400 2.0kb downstream 2.0kb downstream 4616 true Chr03: 44423506-44428121 Glycine max
Glyma.03G247400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44426122-44428121 Glycine max
Glyma.03G247400 5.0kb upstream 5.0kb upstream 7616 true Chr03: 44418506-44426121 Glycine max
Glyma.03G247400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44418506-44423505 Glycine max
Glyma.03G247400 5.0kb downstream 5.0kb downstream 7616 true Chr03: 44423506-44431121 Glycine max
Glyma.03G247400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44426122-44431121 Glycine max
Glyma.03G247400 10.0kb upstream 10.0kb upstream 12616 true Chr03: 44413506-44426121 Glycine max
Glyma.03G247400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44413506-44423505 Glycine max
Glyma.03G247400 10.0kb downstream 10.0kb downstream 12616 true Chr03: 44423506-44436121 Glycine max
Glyma.03G247400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44426122-44436121 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308156 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.1271 0.0 238.429 High  
cufflinks 80.9884 0.0 231.323 High  
cufflinks 85.1381 0.0 244.654 High  
cufflinks 189.22 0.0 622.893 High High
cufflinks 60.2067 0.0 166.794 High  
cufflinks 161.892 0.0 514.665 High  
cufflinks 12.2371 0.0 33.6111   Low
cufflinks 142.529 0.0 445.173 High  
cufflinks 63.0295 0.0 175.33 High  
cufflinks 66.445     High  
cufflinks 38.557     High  
cufflinks 49.516     High  
cufflinks 49.536     High  
cufflinks 19.701     High Low
cufflinks 8.282     High Low
cufflinks 87.493     High High
cufflinks 54.356     High  
cufflinks 55.532     High  
cufflinks 31.438     High  
cufflinks 67.787     High  
cufflinks 36.102     High  
cufflinks 75.234     High  
cufflinks 64.961     High  
cufflinks 32.759     High  
cufflinks 77.77     High  
cufflinks 32.663     High  

0 Strain