Gene : Glyma.03G248000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31358:SF4 - PROTEIN WAVE-DAMPENED 2-RELATED Genomic Order:  2480
Name:  ? Glyma.03G248000 Secondary Identifier:  ? PAC:30518185
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G248000 0.5kb upstream 0.5kb upstream 5350 true Chr03: 44455474-44460823 Glycine max
Glyma.03G248000 0.5kb upstream 0.5kb upstream 500 false Chr03: 44460324-44460823 Glycine max
Glyma.03G248000 0.5kb downstream 0.5kb downstream 5350 true Chr03: 44454974-44460323 Glycine max
Glyma.03G248000 0.5kb downstream 0.5kb downstream 500 false Chr03: 44454974-44455473 Glycine max
Glyma.03G248000 1.0kb upstream 1.0kb upstream 5850 true Chr03: 44455474-44461323 Glycine max
Glyma.03G248000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44460324-44461323 Glycine max
Glyma.03G248000 1.0kb downstream 1.0kb downstream 5850 true Chr03: 44454474-44460323 Glycine max
Glyma.03G248000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44454474-44455473 Glycine max
Glyma.03G248000 2.0kb upstream 2.0kb upstream 6850 true Chr03: 44455474-44462323 Glycine max
Glyma.03G248000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44460324-44462323 Glycine max
Glyma.03G248000 2.0kb downstream 2.0kb downstream 6850 true Chr03: 44453474-44460323 Glycine max
Glyma.03G248000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44453474-44455473 Glycine max
Glyma.03G248000 5.0kb upstream 5.0kb upstream 9850 true Chr03: 44455474-44465323 Glycine max
Glyma.03G248000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44460324-44465323 Glycine max
Glyma.03G248000 5.0kb downstream 5.0kb downstream 9850 true Chr03: 44450474-44460323 Glycine max
Glyma.03G248000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44450474-44455473 Glycine max
Glyma.03G248000 10.0kb upstream 10.0kb upstream 14850 true Chr03: 44455474-44470323 Glycine max
Glyma.03G248000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44460324-44470323 Glycine max
Glyma.03G248000 10.0kb downstream 10.0kb downstream 14850 true Chr03: 44445474-44460323 Glycine max
Glyma.03G248000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44445474-44455473 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254605 5265 Fabidae View MSA
124062203 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.8297 0.0 87.8885 High  
cufflinks 13.9753 0.0 53.458    
cufflinks 39.8918 0.0 151.236 High High
cufflinks 9.93175 0.0 38.912    
cufflinks 8.41527 0.0 33.7938    
cufflinks 13.4806 0.0 51.7378    
cufflinks 6.01542 0.0 26.0564   Low
cufflinks 16.2037 0.0 61.7356    
cufflinks 8.18541 0.0 33.1289    
cufflinks 1.563        
cufflinks 0.63       Low
cufflinks 3.97       High
cufflinks 1.384        
cufflinks 0.88        
cufflinks 0.266       Low
cufflinks 1.466        
cufflinks 0.651        
cufflinks 1.535        
cufflinks 1.43        
cufflinks 0.948        
cufflinks 0.839        
cufflinks 1.185        
cufflinks 2.048       High
cufflinks 0.975        
cufflinks 1.062        
cufflinks 1.472        

0 Strain