Gene : Glyma.03G252200 G. max Wm82.a2.v1
Defline:  (1 of 25) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  2522
Name:  ? Glyma.03G252200 Secondary Identifier:  ? PAC:30517646
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G252200 0.5kb upstream 0.5kb upstream 5361 true Chr03: 44773982-44779342 Glycine max
Glyma.03G252200 0.5kb upstream 0.5kb upstream 500 false Chr03: 44778843-44779342 Glycine max
Glyma.03G252200 0.5kb downstream 0.5kb downstream 5361 true Chr03: 44773482-44778842 Glycine max
Glyma.03G252200 0.5kb downstream 0.5kb downstream 500 false Chr03: 44773482-44773981 Glycine max
Glyma.03G252200 1.0kb upstream 1.0kb upstream 5861 true Chr03: 44773982-44779842 Glycine max
Glyma.03G252200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44778843-44779842 Glycine max
Glyma.03G252200 1.0kb downstream 1.0kb downstream 5861 true Chr03: 44772982-44778842 Glycine max
Glyma.03G252200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44772982-44773981 Glycine max
Glyma.03G252200 2.0kb upstream 2.0kb upstream 6861 true Chr03: 44773982-44780842 Glycine max
Glyma.03G252200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44778843-44780842 Glycine max
Glyma.03G252200 2.0kb downstream 2.0kb downstream 6861 true Chr03: 44771982-44778842 Glycine max
Glyma.03G252200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44771982-44773981 Glycine max
Glyma.03G252200 5.0kb upstream 5.0kb upstream 9861 true Chr03: 44773982-44783842 Glycine max
Glyma.03G252200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44778843-44783842 Glycine max
Glyma.03G252200 5.0kb downstream 5.0kb downstream 9861 true Chr03: 44768982-44778842 Glycine max
Glyma.03G252200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44768982-44773981 Glycine max
Glyma.03G252200 10.0kb upstream 10.0kb upstream 14861 true Chr03: 44773982-44788842 Glycine max
Glyma.03G252200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44778843-44788842 Glycine max
Glyma.03G252200 10.0kb downstream 10.0kb downstream 14861 true Chr03: 44763982-44778842 Glycine max
Glyma.03G252200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44763982-44773981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254909 5265 Fabidae View MSA
124062143 5270 Rosid View MSA
123739520 5271 Pentapetalae View MSA
122793543 5272 Eudicot View MSA
122048066 5273 Angiosperm View MSA
121349991 5274 Embryophyte View MSA
123381532 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188622 0.0 0.723651 Low Low
cufflinks 8.73835 0.0 23.6949   High
cufflinks 0.785229 0.0 2.79114    
cufflinks 0.831893 0.0 2.94591    
cufflinks 2.1757 0.0 6.91375    
cufflinks 2.47719 0.0 7.71786    
cufflinks 2.65225 0.0 8.19558    
cufflinks 0.225993 0.0 0.859939 Low Low
cufflinks 0.698835 0.0 2.50594    
cufflinks 0.462        
cufflinks 0.118        
cufflinks 1.455        
cufflinks 1.376        
cufflinks 1.554        
cufflinks 0.004     Low Low
cufflinks 5.574        
cufflinks 0.102       Low
cufflinks 2.804        
cufflinks 3.943        
cufflinks 5.226        
cufflinks 0.147        
cufflinks 6.008        
cufflinks 6.066        
cufflinks 0.198        
cufflinks 4.733        
cufflinks 0.183        

0 Strain