Gene : Glyma.03G255800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  2558
Name:  ? Glyma.03G255800 Secondary Identifier:  ? PAC:30516297
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5695 Glycine max pathologic  
Gmax PWY-6608 Glycine max pathologic  
Gmax PWY-6609 Glycine max pathologic  
Gmax PWY-7179 Glycine max pathologic  
Gmax SALVADEHYPOX-PWY Glycine max pathologic  
Gmax URSIN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G255800 0.5kb upstream 0.5kb upstream 6168 true Chr03: 45068892-45075059 Glycine max
Glyma.03G255800 0.5kb upstream 0.5kb upstream 500 false Chr03: 45074560-45075059 Glycine max
Glyma.03G255800 0.5kb downstream 0.5kb downstream 6168 true Chr03: 45068392-45074559 Glycine max
Glyma.03G255800 0.5kb downstream 0.5kb downstream 500 false Chr03: 45068392-45068891 Glycine max
Glyma.03G255800 1.0kb upstream 1.0kb upstream 6668 true Chr03: 45068892-45075559 Glycine max
Glyma.03G255800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45074560-45075559 Glycine max
Glyma.03G255800 1.0kb downstream 1.0kb downstream 6668 true Chr03: 45067892-45074559 Glycine max
Glyma.03G255800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45067892-45068891 Glycine max
Glyma.03G255800 2.0kb upstream 2.0kb upstream 7668 true Chr03: 45068892-45076559 Glycine max
Glyma.03G255800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45074560-45076559 Glycine max
Glyma.03G255800 2.0kb downstream 2.0kb downstream 7668 true Chr03: 45066892-45074559 Glycine max
Glyma.03G255800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45066892-45068891 Glycine max
Glyma.03G255800 5.0kb upstream 5.0kb upstream 10668 true Chr03: 45068892-45079559 Glycine max
Glyma.03G255800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45074560-45079559 Glycine max
Glyma.03G255800 5.0kb downstream 5.0kb downstream 10668 true Chr03: 45063892-45074559 Glycine max
Glyma.03G255800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45063892-45068891 Glycine max
Glyma.03G255800 10.0kb upstream 10.0kb upstream 15668 true Chr03: 45068892-45084559 Glycine max
Glyma.03G255800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45074560-45084559 Glycine max
Glyma.03G255800 10.0kb downstream 10.0kb downstream 15668 true Chr03: 45058892-45074559 Glycine max
Glyma.03G255800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45058892-45068891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299558 5265 Fabidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.12386 0.0 5.99055   Low
cufflinks 15.3581 0.0 51.9288    
cufflinks 3.08088 0.0 12.1792   Low
cufflinks 8.64131 0.0 30.732    
cufflinks 12.7044 0.0 43.411    
cufflinks 8.16007 0.0 29.3312    
cufflinks 9.78304 0.0 34.4316    
cufflinks 10.1938 0.0 35.4906    
cufflinks 8.93354 0.0 31.716    
cufflinks 2.843        
cufflinks 0.301       Low
cufflinks 1.623        
cufflinks 3.473       High
cufflinks 4.437       High
cufflinks 0.245       Low
cufflinks 1.539        
cufflinks 0.749        
cufflinks 2.001        
cufflinks 3.793       High
cufflinks 1.069        
cufflinks 0.476       Low
cufflinks 1.193        
cufflinks 2.497        
cufflinks 0.315       Low
cufflinks 1.29        
cufflinks 0.712        

0 Strain