Gene : Glyma.03G255100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11122:SF10 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  2551
Name:  ? Glyma.03G255100 Secondary Identifier:  ? PAC:30518133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G255100 0.5kb upstream 0.5kb upstream 5347 true Chr03: 45027532-45032878 Glycine max
Glyma.03G255100 0.5kb upstream 0.5kb upstream 500 false Chr03: 45027532-45028031 Glycine max
Glyma.03G255100 0.5kb downstream 0.5kb downstream 5347 true Chr03: 45028032-45033378 Glycine max
Glyma.03G255100 0.5kb downstream 0.5kb downstream 500 false Chr03: 45032879-45033378 Glycine max
Glyma.03G255100 1.0kb upstream 1.0kb upstream 5847 true Chr03: 45027032-45032878 Glycine max
Glyma.03G255100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45027032-45028031 Glycine max
Glyma.03G255100 1.0kb downstream 1.0kb downstream 5847 true Chr03: 45028032-45033878 Glycine max
Glyma.03G255100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45032879-45033878 Glycine max
Glyma.03G255100 2.0kb upstream 2.0kb upstream 6847 true Chr03: 45026032-45032878 Glycine max
Glyma.03G255100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45026032-45028031 Glycine max
Glyma.03G255100 2.0kb downstream 2.0kb downstream 6847 true Chr03: 45028032-45034878 Glycine max
Glyma.03G255100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45032879-45034878 Glycine max
Glyma.03G255100 5.0kb upstream 5.0kb upstream 9847 true Chr03: 45023032-45032878 Glycine max
Glyma.03G255100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45023032-45028031 Glycine max
Glyma.03G255100 5.0kb downstream 5.0kb downstream 9847 true Chr03: 45028032-45037878 Glycine max
Glyma.03G255100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45032879-45037878 Glycine max
Glyma.03G255100 10.0kb upstream 10.0kb upstream 14847 true Chr03: 45018032-45032878 Glycine max
Glyma.03G255100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45018032-45028031 Glycine max
Glyma.03G255100 10.0kb downstream 10.0kb downstream 14847 true Chr03: 45028032-45042878 Glycine max
Glyma.03G255100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45032879-45042878 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026302 5273 Angiosperm View MSA
122301747 5265 Fabidae View MSA
124063717 5270 Rosid View MSA
123740871 5271 Pentapetalae View MSA
122785703 5272 Eudicot View MSA
121296268 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30963 0.0 12.6529   Low
cufflinks 9.42371 0.0 38.2979    
cufflinks 21.3098 0.0 96.67 High High
cufflinks 9.87896 0.0 50.1098    
cufflinks 15.2884 0.0 74.4961    
cufflinks 7.23756 0.0 32.0552    
cufflinks 23.4898 0.0 96.9094 High High
cufflinks 7.22201 0.0 32.1751    
cufflinks 10.131 0.0 41.8441    
cufflinks 0.72        
cufflinks 1.235        
cufflinks 1.439        
cufflinks 1.571        
cufflinks 2.677       High
cufflinks 2.387       High
cufflinks 0.627        
cufflinks 0.221       Low
cufflinks 0.9        
cufflinks 1.4        
cufflinks 0.502        
cufflinks 1.422        
cufflinks 0.573        
cufflinks 0.825        
cufflinks 0.948        
cufflinks 0.634        
cufflinks 0.399       Low

0 Strain